Clone Read LE_HBa0071M21_SP6_16360

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0071M21_SP6_16360
Primer
SP6
ID from Seq. Facility
LE_HBa_071_M21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1132 raw
Sequence
>LE_HBa0071M21_SP6_16360 (raw untrimmed)
CTATTGCCCATCTGTGTCGCTCCCTCCTACTGAATATGTNCGCGTTTGAGCTCACTCTCTTTCATCTNGTGTGAATCTACTATTTTGTAAACTTCCTCAA
CTACATTCCTGCATACGTCACCACTTGCGATATATGCATACGCGTCAAGCTACCTGCTCAATCTATACGACCTTGTCCTCATTCAGTGAGCCTGCNGNGT
NGCAACGCACTACTTTACTTCGACGCGGCGATGCTATGAATGTAGNGTGCTCTGGCGCGCTCATTGCGATCTCCTCTCACTCANCTCTNGAGCCTCTATC
TTCCGTTGATATTTGTCTTGGTACCAGTNTATATGAATACTATTATGCTCTTACTGTCTATGGTTTAAATAGCCTGAACTTATTTGGATATATTCCATAC
ATCTGATACGCAGCTTTACACTTCTTTTACTACANCTACAGCCGGCTGTGAGTTCACAAACCACGTAACGATNCGTCTCTCTATGCTTCTTCTTACTGAT
CATCTTTGCACACATTAGTATTATAGCAATTTCATGCTCAATGACTGATACTTATAATTATNGTGTCTAACACATACAGTACCCNTCAACTCAACACTAG
TCTTCTTGCTACTCTCATACTTCATACTGTACTCGCTCTACTCCTCGAACGACGCATCATGATCTCCCTATATCTCGTCGCTGTCCTCAACATGATCACG
TCTGCACGTGGGCTAGCTNGCTATCACATTCTGCTTGTGTGTCACTTCCTCTGTAAGAGAC
TGCACTGTTTGAANGATGCTGAGATAGACCACATGGTCT
TCTCTTCGTTCTCTCTCGTGTAATGTGAGAACCCACAGCGACATCTGCGCATCTATCTACTCTTTCAACTGCGCCGCGTTCTCATATCTCAATACTCTAT
CTGACATCCTGCATCACTGGATCTTTGCTTAGTCCTCCTATTCTGATCTTACTTTTACTTTTATGACGTTTACATTCCTCATAGGNATCAGATCGTGAAG
GGTCTATTATCATGCTTACCTACGACTCTCTCGCGCTTTCTTCTCTTACGCGTCTTCTATCACTGCATGTTCACTCCATCTCTTCTCCTCACACTCCTCT
CGTGTATCGTCGCCATCGCCTCNGTACCACTT
>LE_HBa0071M21_SP6_16360 (trimmed for quality and cloning vector)
TGC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.438993
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0071M21
Clone
Clone name
hba-71m21
LE_HBa0071M21
P071M21
Clone type
BAC
Contamination
none
Estimated length
104,146
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found