Clone Read LE_HBa0076C17_SP6_17408

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0076C17_SP6_17408
Primer
SP6
ID from Seq. Facility
LE_HBa_076_C17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
623 trimmed for vector and quality, 789 raw
Genbank Accession
DU035172
Sequence
>LE_HBa0076C17_SP6_17408 (raw untrimmed)
AATCAACATTACCGGGTTTTTATTCTTATTCTTATTAATTATCTCTTTTTTTAATTTCAAACAGAGACAACTTGAGAACTACGCTTTGGAGTTTTTTGGG
TTAATTCTCTATCTCTTTCTTTTCAATCTTAATTGATGATTCAGAGTCATTGTAAGATTAATTATTAGATTATGAGTAGTTAAATACCTGTCATGCCTCA
AAAACCATTAAGACGGATAGGCATCTGATGCCCTAAAGTCCCGAGAGAACCAACCTGTAACGTATTCTTACTATGCATATAACTATAACAATCGTGACAA
GTTTACCTAGGATGCATCGATACAAAACCAACATAAGTAGACCCAAAAGTTATATGCAAAACTTGGCCCTTGAGGCCACAACTCCTTAAGACACAACTGA
ACCATGTACATACATCTACAAAGACTCTAAAAAATAGAAGACTAGAGTAGGTCGGGACAGACCGTGCCTTACCCTTATCTACGATGCAATATCGAAATGA
ATTTCCAAGAACTCAATAAAGTTATCGAATCAACTTGGAGATCACCAAAAGTAGAAGAGTGTCATGTGCTCCTACTGAGGAGGTCTACTAGCTGGAGCAC
CTGTGCCTGCAGCATGAAATGTAGCATCCCCTGCGAGGGACATCAGTTAAAAAAATGTACTGAATATGTAAGCAATAGCATAATGTAATACCGAGAGCTC
CAATGAAATCAAGTACCCAAAAATGAGTGCATAGATTAGGAAAGAAAACCCCCTTTGCCTTGGTGGGAATTCTGGTAGGTTACCTTATT
>LE_HBa0076C17_SP6_17408 (trimmed for quality and cloning vector)
ATTAATTATCTCTTTTTTTAATTTCAAACAGAGACAACTTGAGAACTACGCTTTGGAGTTTTTTGGGTTAATTCTCTATCTCTTTCTTTTCAATCTTAAT
TGATGATTCAGAGTCATTGTAAGATTAATTATTAGATTATGAGTAGTTAAATACCTGTCATGCCTCAAAAACCATTAAGACGGATAGGCATCTGATGCCC
TAAAGTCCCGAGAGAACCAACCTGTAACGTATTCTTACTATGCATATAACTATAACAATCGTGACAAGTTTACCTAGGATGCATCGATACAAAACCAACA
TAAGTAGACCCAAAAGTTATATGCAAAACTTGGCCCTTGAGGCCACAACTCCTTAAGACACAACTGAACCATGTACATACATCTACAAAGACTCTAAAAA
ATAGAAGACTAGAGTAGGTCGGGACAGACCGTGCCTTACCCTTATCTACGATGCAATATCGAAATGAATTTCCAAGAACTCAATAAAGTTATCGAATCAA
CTTGGAGATCACCAAAAGTAGAAGAGTGTCATGTGCTCCTACTGAGGAGGTCTACTAGCTGGAGCACCTGTGCCTGCAGCATGAAATGTAGCATCCCCTG
CGAGGGACATCAGTTAAAAAAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.969867
Expected error %
0.296828
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0076C17
Clone
Clone name
hba-76c17
LE_HBa0076C17
P076C17
Clone type
BAC
Contamination
none
Estimated length
116,017
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found