Clone Read LE_HBa0076K23_T7_17805

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0076K23_T7_17805
Primer
T7
ID from Seq. Facility
LE_HBa_076_K23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1229 raw
Sequence
>LE_HBa0076K23_T7_17805 (raw untrimmed)
CGTGTCAATCTTAGGTGCCAGTGGGTGGATTCATCTGATTAGCTGTTATCATAGACCAGACATTGCCATCGCATATGTATAAATATGTTATTGTCTGGTA
CTGACCCCTTTTTAGCGTGGCTCCTACTTATACGCACGCCTACTTATTATATTGCGGTTAGACCCCCCTCTTCTGTGAGATGGCGTAGTGACATCTATCA
AGCCGTAGTTATCATTGTTAATATCCTTTTGGATGATATATACGTTTGTGTTTGTAACTCATTCGCTGAGAACGACTCTCCTCAGCGTTTCAGTTTACAT
TAATATGTCTCTACTTTGACCTGGTACTCATTATTTATCTCTTGATCCATGGTCATTTACTTCGTAGCATGCGTGACCTTGCGACCTCCTACTTTTCTAT
CTGCCTCTCCGTGCGTATGCATGTCTCCTAGAAGACATTCGTCTGTAGACATATTCACTTATACGCGCAATCCGATCTTAGCCTATATATCAATAGTTAT
CTATCATTGCAAGTCGCTGCATGTGCAATTCTATTACTATATCTGATAGACACTCTTTATACCACGTGTGCGGCAACTCTACCTCGAATCCCAGCATCGC
CATACTTATTTTGTTTTACTATTTATACTCCCTTCTTCTTCTCATAGTGCTAANTCGATGAGACTATCTCTTATATGTCATTCCTTGGCCATTCATCATA
ACCAATTTATTCTCTTGGTATAACTACTACATAATCGCGTCATCAAAATTAATATTCATTAATCCTTTTACCTCCTAACCTAATTACACTAGTTTCATCT
TTCTTATATTATGTCTAATTTACTTGAAATATTACGTTTACTCGAATTTTGTCTCGCATGTCGATCAACTCAAACTTCTCACCNAATCTGCCTACTCGCT
CTGCCCGAATATATAGTCAAACTTTAACAAATTATATCTACTTCGCTTTCATTACTATTATCATATGATTTCCACTTATATATTATAAATCCAATCAATG
TCATTGGTCCATACCTATTATATACCTTCAAATTAACGCTATAATTTTATAATCTGAAACTTAAAAATCATAATTATAATACATCCTTATTATCAACTCT
ATCTCTTTTTGCTTCTT
TTTTTTCTCATCTCATTATTCATATCTCGGAAAGTACGATGGACCTTCTGCANAGCGGAATCTCTATGCCTATTCCACTCATA
CGCTCCTCGCCGAGCAACTTTACTATATA
>LE_HBa0076K23_T7_17805 (trimmed for quality and cloning vector)
TTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.500468
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0076K23
Clone
Clone name
hba-76k23
LE_HBa0076K23
P076K23
Clone type
BAC
Contamination
none
Estimated length
91,529
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found