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Clone Read LE_HBa0076O15_SP6_17980

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0076O15_SP6_17980
Primer
SP6
ID from Seq. Facility
LE_HBa_076_O15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1242 raw
Sequence
>LE_HBa0076O15_SP6_17980 (raw untrimmed)
GTGTTTGGTGGACAAAGCGTGTATTTATCTTTCTATCTACTATAGCTACTCCTGTACGGTACGCACTTAGACCATGATTGCATTAGTTGCTGCACGTCGT
TGCTTCATCCAGGTCACCACTTGACGTAGTCAAGCCTCGCCCGATAATTTTTGCCTCACGATAGAAAAGAATACGGTATATCTCGCTAACTCTACTTGTC
ACTGGTCGCTGCGATATTATCGCTAGACAGATGCTTAAGTAGTTCTTCGCACGAGTCCACACAACATATATCGACCACTCTGCACTTAGTGTTACGTNGA
CTCGTCCTCCGTTCCTACTATGTGTGACCTACACTCACACTACTTGGCTAGACCACGTTACGCTAGATTGGTGCTACGATCTGCAGAAGCGAGTGCTCCC
TATCATCGTGTAACGCGTATGTGCAGATTGAGACATCACGACTCGATCGACTGCTTCTCTCTAGTACTGCTCTATGCATATGTCAGGTAAGAGATCACTA
CTGCACGTCTTATTATGGTTTTGGCGCTCTAAAGCATTGTCGTCTCTCAACGCACCTCGTCGCTCTCTAACTCTC
GCGCGATAGCCTCGACAGCTCTCTT
GATTTAGCAGCAGCATCTCATATTACGTCCACGGATGACATTATTGCCACGACCAACGTGCAGAGACTGCCCACGATTGTCCTGCAAAGTTTTATATTTG
TGAATATCTGCTAAGGTAATCTCAGTATGTAATTAGTCTCGATATGGTTGCGTTGTCTCGCATTAGCCCATATGCGCTTTTGTATAAAGTCGATACTTTA
TACCTTCTTATTTCTCACAGCGTCAAGGCCATGTACTGTCCTCTACCGTTATCTGCTCCCATAACCATTCTCATTTCCAATCACATAATTTGGCTCAAAT
CGGTGGCTGCTCACTATGCATCACTTTCGATAAGACTTCATTATATGGCACCAACCGCTCATGGCAATATGGCGTCTCGTTCCGTAAGGTTTGCACCAAC
AATAGCTTGAATATTATGAAACCCTTCTGATGTCTATTCCTACACAAGTAAATTTTCTATTTGTTATCCTTGGTGCTTTCATCTTTGCGCTTTCCTTCGG
ACACGTCACTTGCGGCCTACCTTCCCCCGGCCATCATCACATCAACACCATAAACCATTCGGGGCTTCCTTATATCACTACTGCGCCTAGGGTCTCTCGG
ACGTGCTCTAGACGTTGTGTTGTTTCTGCCTGCTTCCCCCAT
>LE_HBa0076O15_SP6_17980 (trimmed for quality and cloning vector)
GC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.750594
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0076O15
Clone
Clone name
hba-76o15
LE_HBa0076O15
P076O15
Clone type
BAC
Contamination
none
Estimated length
126,218
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found