Clone Read LE_HBa0077K10_SP6_18546

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0077K10_SP6_18546
Primer
SP6
ID from Seq. Facility
LE_HBa_077_K10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
12 trimmed for vector and quality, 937 raw
Sequence
>LE_HBa0077K10_SP6_18546 (raw untrimmed)
GGGCCCTTCGTGCGGAGAAGTACGAAGTGATGTGGGCTCGTGGTGACAAGTTTTCTATCACTGTATGTATTTCACGGCTCCTCGTTCAGAGACTCACTAG
A
TTTGGTGGAAAATGATACTGCATCACAATCATGGCTATAGATATACAGAGATCAGATTGAACGTAGACGGGGATTGATAGCTTGACTAAATTGATTTTT
CTTTCTGCAATGAAACCAACATAGTTGAAGAAAGTGTGTTCATTGGCTTGATCAGCAATTAGACTAATTTTCATAGGATAATCATCCACCACCAAGAAGC
TTGATGTGCTGGTTTTGTGTTTTTTCTGACTTGAGGGGATATGTGATGGTCAGATCTCATGGGGGTGCACTTCCCATGGTGATCTTTTTGGAATATCATG
CTCGCTAACCCCGGGGATCTCCTTTGAAGACCAAGGGACAAGTAAATGAGCTGTTCGAAACTTCTCAGGCCGAGGTTGCTTCTTTTTTGAAGTTAGACAT
GCTAAAGCTGTCGCTTATACACTGGGGGAGAGCATTAGGAGATTGTTCAATAATCTAGAGGAAGAAAGCGAACCCTGGACAGCTCTGTCTCAGATCCATC
TCTCATTTCGCCAGACCTCATCGTCCATCCTGCCGAGATCTTGGCTAAACCGGTAACCTGGGGGGGTGGACGTAATTCCCTGCTCTAGATCGTCGGTGAG
CGAGCGATCGCTGACGCAACGAAGGAACACCGGCGCCTGTTTCACCGTTGACCATAGGAACGGATATTACTAACTGACTCTCGAACAACTCTTCCAACCG
GTAACGGACAAGCCGGCCCCGACTTCCCCTTCCCCCAGAAGGTCTACCCGAAGCTGTTTTATGAGGCCTAGCGGCTTCATGAACCGTTGTATGCCGGCAT
ACTATCTCCGCCCTACCCCTCGCCCGCGTCTCTGTCG
>LE_HBa0077K10_SP6_18546 (trimmed for quality and cloning vector)
TTTGGTGGAAAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.37267
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0077K10
Clone
Clone name
hba-77k10
LE_HBa0077K10
C03HBa0077K10
P077K10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found