Clone Read LE_HBa0005H23_SP6_1916

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0005H23_SP6_1916
Primer
SP6
ID from Seq. Facility
LE_HBa_005_H23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 427 raw
Sequence
>LE_HBa0005H23_SP6_1916 (raw untrimmed)
NAGCTATTTATGNNTNNNNNNNGGNNNNNANNNGNNNNNNNNNNNNNNNNNNNGNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCNTTTTTGGGAAGNNNNNNNNNNNNNNNNNNNNCCCCCCNNTNNNAGGNNNNNCCCCNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTCTC
NGGAGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNN
>LE_HBa0005H23_SP6_1916 (trimmed for quality and cloning vector)
N

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0005H23
Clone
Clone name
hba-5h23
LE_HBa0005H23
P005H23
Clone type
BAC
Contamination
none
Estimated length
112,776
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found