Clone Read LE_HBa0079D13_SP6_19752

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0079D13_SP6_19752
Primer
SP6
ID from Seq. Facility
LE_HBa_079_D13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
557 trimmed for vector and quality, 884 raw
Genbank Accession
Sequence
>LE_HBa0079D13_SP6_19752 (raw untrimmed)
AAAAAGTTTGGCAAAGATAGAATAACTGCTCGCAACTTTTCTCTGCCATAATAGTTGTCTTATTTACATTGAGGTCTCGGTCCCGGTAATGTTCTAAACA
TCATATTGCAGTAAGATATTTTAATCTTATGTATCTAGTTTATTATATGCTCAGATATTCATTCTAATAACTGATTTTCATGCTCTTTTTTGTGCTTAAA
TATTAGACGAAGAATGACGAGCTCAAATGAAAAGTCTCGGACTAATAGTGTTCATATTTTATTTATCTTAATCAGTTTGAAATTGAAGAATGTATAAGTG
ATCTATCTTATTTTTTTCATTTAGAAATTCACAATATAGATGCTGGCGAAGCCTTACCGAAATTTTTTCATAAAGCACCATGGTATATTCATTTGTTGTC
TCTACAATTTAAGACATAAATATTTGCAACACCGAGAATCTTGCATAATAAATGTAATATAAGAGAAATAGTGTTTAAATTAATTTAATCTTTTTTTTTA
TGGTAAATCTTTAGGTTTGACTTCTTTTGCTAATACTATATCAGTGCATTCACACGAATAAAAAACTTACTATGAAAATTATTTAAAGAGTTTACCATAA
GGTAAACTCTGTTTGTATTTATGTTTATCCACATGTTTATTTCAAATTTATTCTATGTTCAAATTATATGTTTAGGTTTGACCTAAGGTTCATATCATTT
GTTCCAAATTAGTGGAAAGCATATGTTTCCAATTATTGGGGTGATGAGAAACATTTTCAAATTTATGATTGCGTAGATCCATATCCTAATCTATTTCAAA
TAATATATCTTTACTGCCTATTCCCTTATATCTGACCCGTAAACTCATCATAAATGATGATGGGTTAGCTTATTTAGTCATTTA
>LE_HBa0079D13_SP6_19752 (trimmed for quality and cloning vector)
TTGAGGTCTCGGTCCCGGTAATGTTCTAAACATCATATTGCAGTAAGATATTTTAATCTTATGTATCTAGTTTATTATATGCTCAGATATTCATTCTAAT
AACTGATTTTCATGCTCTTTTTTGTGCTTAAATATTAGACGAAGAATGACGAGCTCAAATGAAAAGTCTCGGACTAATAGTGTTCATATTTTATTTATCT
TAATCAGTTTGAAATTGAAGAATGTATAAGTGATCTATCTTATTTTTTTCATTTAGAAATTCACAATATAGATGCTGGCGAAGCCTTACCGAAATTTTTT
CATAAAGCACCATGGTATATTCATTTGTTGTCTCTACAATTTAAGACATAAATATTTGCAACACCGAGAATCTTGCATAATAAATGTAATATAAGAGAAA
TAGTGTTTAAATTAATTTAATCTTTTTTTTTATGGTAAATCTTTAGGTTTGACTTCTTTTGCTAATACTATATCAGTGCATTCACACGAATAAAAAACTT
ACTATGAAAATTATTTAAAGAGTTTACCATAAGGTAAACTCTGTTTGTATTTATGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.915319
Expected error %
0.407463
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0079D13
Clone
Clone name
hba-79d13
LE_HBa0079D13
P079D13
Clone type
BAC
Contamination
none
Estimated length
97,384
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found