Clone Read LE_HBa0079E24_SP6_19822

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0079E24_SP6_19822
Primer
SP6
ID from Seq. Facility
LE_HBa_079_E24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
694 trimmed for vector and quality, 838 raw
Genbank Accession
Sequence
>LE_HBa0079E24_SP6_19822 (raw untrimmed)
AAAAAAAAATGGCTTTCGCCTTGTATGTACTTAGNATGGNTGNGGAGATTCNNAAGAAGAGCAGACATTGTGGGTGAGGGTGATCCCTTTAAATATGAGA
AGGAAGATTTCTGGAAGACCAAAGAGCCTTTCCCTGCTTATGGGATCAGTTTGTGGAGGTCAATCAGAAACTTGGGGTATGTTTTTTTAAAAGAACAAGC
TTCAATGTAAAGAGTGGAAGGAAGATCAAGTTTTGGGATGATGATTGGTTAGGAAAGGCAGAAGTGCGGACTCCTCAAGGATGGAACCTGACATATATAA
GACCTATGCATGATTGGGATGTGGAAAGACTGGCTGAATTTTATGGCACCTTAGATCAGTATACAGAACCAAAGGAAGGAGATGATAATCTCAGATGGAA
GTGCCATAACAACAGTTTATTCACAGTTAGCTCTGCTTATAAGAGTTTGATTCAGACGGGGTCTCAAATTAGTTTCTTGCCCTGGAAGCTTATATGGAAA
GTAAAAATTCCCTACAAAGTGACAGTTTCACTTGGCTGGTAGTGAAAGAGGCTGCTCTAACACAAGAAAACCTCATGAAGAAGGGCATACAAATGTGTCC
AAGATGTTTTTTTTGTGAGCAAAAGGCAGAGACAATCAACCATCTTTTTTACACTGTAAAGTGGTTAGCCAACTATGGAACTTGTTTACTAATGTCAGAG
GCATAAGGTGGACTATGCTTAAAAGGGCAGGTCAGGCTCTAGTAAGCTGGAACTATGAGGGGAGTGGTAGCATGGACAAAAACAGATGGAAAATTGTCCA
GCAGTGAAACTGTGGACCATTTTGGAAGGAAAAAATTC
>LE_HBa0079E24_SP6_19822 (trimmed for quality and cloning vector)
GAAGAGCAGACATTGTGGGTGAGGGTGATCCCTTTAAATATGAGAAGGAAGATTTCTGGAAGACCAAAGAGCCTTTCCCTGCTTATGGGATCAGTTTGTG
GAGGTCAATCAGAAACTTGGGGTATGTTTTTTTAAAAGAACAAGCTTCAATGTAAAGAGTGGAAGGAAGATCAAGTTTTGGGATGATGATTGGTTAGGAA
AGGCAGAAGTGCGGACTCCTCAAGGATGGAACCTGACATATATAAGACCTATGCATGATTGGGATGTGGAAAGACTGGCTGAATTTTATGGCACCTTAGA
TCAGTATACAGAACCAAAGGAAGGAGATGATAATCTCAGATGGAAGTGCCATAACAACAGTTTATTCACAGTTAGCTCTGCTTATAAGAGTTTGATTCAG
ACGGGGTCTCAAATTAGTTTCTTGCCCTGGAAGCTTATATGGAAAGTAAAAATTCCCTACAAAGTGACAGTTTCACTTGGCTGGTAGTGAAAGAGGCTGC
TCTAACACAAGAAAACCTCATGAAGAAGGGCATACAAATGTGTCCAAGATGTTTTTTTTGTGAGCAAAAGGCAGAGACAATCAACCATCTTTTTTACACT
GTAAAGTGGTTAGCCAACTATGGAACTTGTTTACTAATGTCAGAGGCATAAGGTGGACTATGCTTAAAAGGGCAGGTCAGGCTCTAGTAAGCTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952715
Expected error %
0.414926
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0079E24
Clone
Clone name
hba-79e24
LE_HBa0079E24
P079E24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found