Clone Read LE_HBa0079H20_SP6_19958

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0079H20_SP6_19958
Primer
SP6
ID from Seq. Facility
LE_HBa_079_H20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
345 trimmed for vector and quality, 853 raw
Genbank Accession
Sequence
>LE_HBa0079H20_SP6_19958 (raw untrimmed)
TTTGTTGCAGGTTTATGGGAAAGAATGAATATCTAGAAAATTTCTTAAGTTAAGACAACCTTTGTTTTTGGTTAACTTCAAACAACCATAACTCCTAGAT
CTTGATGAGTTAAAGGTAATTCTTGATATGGTTAGAAAGCCCTTAGAAAGATATTTCCAATCTAAGTTTGCGCCATTTTGATATCGTATGAGAGTGAGTT
ATGAATTTCAAAAGTTGGGGTATTGGATTAAGGATAGTCCAATCCGGAATTGGGAAAGGAAAATTTGTCTTTTCCTTAACCAATTGTTTTATTTTATTTT
TTGGTAATACATTGGGGGTCTAAACTAGTTTTATTAAGTTCATATTTTATAAAAAAAAGTTAGGTTTTTGAGAGAAGAGAAAAGAAGAGGAGAATAAAGG
AGAAAGGAGAAGATAATGCTAAAACGTTAGAGGTATGTGAGATATTTTCATGTTGGACTACTTCATTCACGTACCCACTCGTTTACATCACAATTTTTGG
GTTGGTTACACGATAGAGAGTGATATTCTTCAGTATCTTTGTCGCATCCTAATGTGTTGAGTAGTCGAATGCCTAGATGTCTTTTGTTTCTTGTTTTCGC
GTTGTCCTCTACGCACACTTCCAGGGCACTAACACTTATTACCTGTCTTATACTGCTTGGTCTATTATCTGGGGTCTTACTTGTGGTAGCAATATAAGTT
CCTAGATATACGCTGCTACCCTCCCCTATTCATTTTCTTCTCTTCATCTCTGCTCCTGCATGCTCACTTTTTTCTTTTTGTCTTCTTGTGGTTTTTCTTT
CCTGCGCTGCCCCGCGTATTGCTCACTGCGCTCCGAGTCGGATGCTTGCTCAA
>LE_HBa0079H20_SP6_19958 (trimmed for quality and cloning vector)
TGAATATCTAGAAAATTTCTTAAGTTAAGACAACCTTTGTTTTTGGTTAACTTCAAACAACCATAACTCCTAGATCTTGATGAGTTAAAGGTAATTCTTG
ATATGGTTAGAAAGCCCTTAGAAAGATATTTCCAATCTAAGTTTGCGCCATTTTGATATCGTATGAGAGTGAGTTATGAATTTCAAAAGTTGGGGTATTG
GATTAAGGATAGTCCAATCCGGAATTGGGAAAGGAAAATTTGTCTTTTCCTTAACCAATTGTTTTATTTTATTTTTTGGTAATACATTGGGGGTCTAAAC
TAGTTTTATTAAGTTCATATTTTATAAAAAAAAGTTAGGTTTTTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.892674
Expected error %
0.611922
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0079H20
Clone
Clone name
hba-79h20
LE_HBa0079H20
P079H20
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found