Clone Read LE_HBa0142J15_T7_199900

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0142J15_T7_199900
Primer
T7
ID from Seq. Facility
LE_HBa_142_J15-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 992 raw
Sequence
>LE_HBa0142J15_T7_199900 (raw untrimmed)
CCTCAGCTTCTATCGTCGCGTTCGTTGCTCTTAGTGGCGCTGCGCCTCTGAACAGGGATAACGGTCTCTGCGCGGGGCCGTGTGCGAGACTCTGAGTAGA
GCTCGATCCAACCGTCTGGAAGGTCGNAGGTGCGACGCGCCCGGCGACCAGGACACACACCGAGCGACGCCACGCTCGCGAGGCTACTTGCCGTGTAGGG
GCGTCGTATGCACGACTCGGTTGGAGCCTTTCTGTTGTTGGCCCTCCATCATATATAAATAAGATGTAATGCACCTCAGCCTGTACGTTCGCTCTCGCTC
ACGATGGGTTAACAGATATGGTAGCGAAGCGGTAACAGATAGCTGAGGCTCTGTCCTCCCGTCGTCTCGCAAGGACTCCTTGACCAGTCATCAACGACAC
CACCGCTCTACCGCCCCTCAACATGCGTAACAGTCTTGTCTCTCGACCGGAACATCTGCTGACCATTACGACAGGGGATGTCGCGCCGCTGCCAACTTAT
CACTGGCCTGAGCGGACATGCCACGCTGCGTAAACCTCCACGAGTGAGAAGTGCGAGTGCGGTGAACNCGCGCACCGGCCTCGACACGGTTGGCGGCTGC
CTGCTGAGCCCGCCGCCGAGCTTACTACATGTTGATTAGTATTGTGCTANCGCTGAGANGTAAAAGCTCCCGCAGAGTCGTGCTACACGTATCCGGAGGG
AAGCACGACGTATACTCTTATCTGCCGACGACCTGGGCCTACTCGCACCAGTGCCTCCCTCGCCACTAGTGCGCGGCTCGCCGCCTTGCTGTTTCCGCCA
GCTCTCGCCNTACTCACTTCTACCCATACCGCCTCCCGCGACGCCTCCTGCACATACGCGCGACTAGTCGAAAACACCGTATGACGCGCGGCCACGTCGC
CAGTATTCGCGTCTCTGCCGCTCCCCTACCTGCGCAACCGCACTCGCCCTACGCCAGGGACCAGNGCAGTCTATCACATGTCACACATCTCA
>LE_HBa0142J15_T7_199900 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0142J15
Clone
Clone name
hba-142j15
LE_HBa0142J15
P142J15
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found