Clone Read LE_HBa0142O01_SP6_200005

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0142O01_SP6_200005
Primer
SP6
ID from Seq. Facility
LE_HBa_142_O01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 827 raw
Sequence
>LE_HBa0142O01_SP6_200005 (raw untrimmed)
ACCCCACTTTTTTCAATATCCCACGGCAGAGAAAAAACAAAAAATACAAAAAAAAAAAATAAAAACAACAACCTAATCCAGGAGAAAAAGAGGGGTTGGT
TGGGGGGNNNGNNGNGGNGNNGGGGGGGGGGGGNNNNNGGGGGGNGTTTTTTTTTTCATGCAGGGACAAAGTGGGGTTTTTTTTTTGGGNNGGGTGGGGG
GGGGGGTGGGGNGTGGGGGGGGTGTGTGGGGTGGGTTGTTTTGGTTGTGGGNGGGGGTGGTGGTGTGTGGGTGTGTGTGGGTGGTGGNGGTGTTGGGGGT
TGGGTGGGTGTTGGTNGGNGGTGTTGGGTTGGGGTGTGTGGGGGGGTGTTGGGTNTTGTGTGTGGTTGTTTTTTNGTGGGTTTGTTTGGGGGTGGTGGTT
TNTGTGGTGGGGTGTGGGGGGGGGGGGGGGTGGTGTGTGTNTTNTTTGGGGGGTGTNTGTGGGTGGTGGGTGTGGGTGGGTGGGGGGGGTGGGGTGGGGG
TNTTGGTGTGNTGTGTGTTTGTTGTGTTGGGGTGTGGTGGTGTGTGGGTTTGGGTGTGGGGTGGGTGGTGTTGGGTGGGGTGTGGTTGGGTGGGGGGTGT
GGTGGGTGGGGGGGTGTGGGGTGGTGGGGGGGGGGTGGTGGGGGGGGGGGGGTGGTGGGTGGTGGGTGTTGTGTGTGGTGGGGGGTGGGGGGTGGGGGTG
TGGGGNGGGGGTGGGGGGGTGGGGTNGGGGGGGGTGGGGNGGGGGTGTGGGGGGGGGNTGGNTGNGTGTGGGGNGGGTGGTGTGTGGTGTGGTGTGTGTG
GGTGNTGTTGGTNGTGGTTTGTTGGTG
>LE_HBa0142O01_SP6_200005 (trimmed for quality and cloning vector)
AAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.335987
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0142O01
Clone
Clone name
hba-142o1
LE_HBa0142O01
P142O01
Clone type
BAC
Contamination
none
Estimated length
99,219
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found