Clone Read LE_HBa0151K04_T7_200296

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0151K04_T7_200296
Primer
T7
ID from Seq. Facility
LE_HBa_151_K04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1333 raw
Sequence
>LE_HBa0151K04_T7_200296 (raw untrimmed)
AATTTACTTGTAGTCTCTCGCTTAGTTTCATCATGTGGATCCGAGCGAGGTATCTTCAGTAAAGATNGTACCTTGGAAATGTCATAGGCATAGTCTATGG
TGTAAATGTGTATAGGTCACGTAGTTGCACCTCTTTTAGAGAAGGGGTACATGTAGTGATATATAGTGATGTTACAATAGAGTGTGATATATTACCCTTT
ATAGAAAGAAGAGGGCAGTAGATGTTATAGTGTTTTGTTGGTTGATATATATTGTGAATAGTACGTTATGTGATTAACGTAGTTATATTTGTGATTGTTT
TTAGGGTTGTAGTTATTGTATTATATAATTGAATGAGTTTATTAAAATTAGTTGAAAAATGTATTGTAGATATTGATTCGCGGTAGCTCGAATTGATGTG
ATTTCAGTGTAAGTGTTGTATAGCAAAGCAATGTACTGTAGTTCGAAATGAGTGTTGTTGAGTTTACTCTGGATATCAAATAGAAATGGTGTGAACAGTA
ATGGTGATATGTTGTGTGATTTGTAATTGATAGTTCTTCTGTAATAAATTGTATTAATGTGGCCATAGTTTTCTTTTGTATACAAGATATTTGAATTTCA
TTATGGTGATGGAGAAGACAGGGTAATATTAATTCATCAAAAGATTAATAGAGGAATGTGGAGGTGTAATCTATGTGTTGAATGATCTCAAATTCTATAT
ACATTATATAAATAATCTGGAAAGTGGTACAATCATGTATATTTCTTGGTATGGTTCTATATCGNAGGCCTGTATACTAATGTGTTTTTGTGGTTCAGTG
ATAACGAAAAGGTTGATCAAAGAGATGTGTACTTGATGGGTGTGAGTCATATTGTATTCATGGGTAATGATGTGTAGTTACATCATGTTAGTTGGGAATG
AGCATGCAGGTTTGTGATTGCATATAGTATTACATAATCAAATTAGTGGGGTAATAATATTGTCGGTGTCCCACATTGATACTTGATTATATAAACGATG
TAGATCTTGTTAAGATATCTTATTGAAGGGAAGGGTTATGTGTAATTCATGTGTAGTATTTTCTTTATTGGTATATATGTGTACTTAACTATAATTTTTA
TTGTGTTAATATGTTTTGTACATATATG
ATATATAATATTTTGTATTATATTATATTATAAGTATGTGTATATAATTATTAATATTAACGTATTTTTATA
ATTGATGTATAGTAGTTTTAGGATATAATTGTGGTGATAGAACTTTTGTTTGATATTAATTGTTTATCGAGGTTATGTGGTGGTTTGTTAAGATCTTTTA
CTGAGGCGATTATTTGAGAATGTTGAGAGAAGG
>LE_HBa0151K04_T7_200296 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
8.23994
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0151K04
Clone
Clone name
hba-151k4
LE_HBa0151K04
P151K04
Clone type
BAC
Contamination
none
Estimated length
81,768
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found