Clone Read LE_HBa0151P04_T7_200416

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0151P04_T7_200416
Primer
T7
ID from Seq. Facility
LE_HBa_151_P04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1189 raw
Sequence
>LE_HBa0151P04_T7_200416 (raw untrimmed)
AATATAAACTCGGCAGACATCCGACTTGTGCTGACCAATAGACTGGACCAGCGGGTATACGTCTTCCTGTGTACTACTTGCCAGGGGTGTGTAATGGTGT
GCGATAAATGACAAATGAAAAACAAATGTACCCTTTTTTAAAAGTCTGTGTATATGTATGAAGAAAAGCCATTGTATGAGTNTTTAGATCTTTTAATACA
TGTTACTAAGTTAGTGTAGCATGTCGTTGATGTCGACTCATTCTTAACACAACGTTTCAACGGGATGTCTAGATCGCTCGATATATA
TTTTCAAAAGTAA
ATATGAGATTGAGGTGTCATATTATAAATATGTGCTGACGTGTAGAGTAGCGAGAGACGGTGCAGGGCATACTGATGCGTAATTATGATACTATGTAAGA
ATAACCTCCCCCAGCGAAAGTTTTGTTATTTCTAATTTTATGTGTTTCTTTTGTTGGTTTCTTTGTTTGCTTCTGCTCGCGTGACTTCACAAAGAAATAC
GACAACACAAATTATTATTATTTGTAAAAACTTGAACAGTCTTTACATTATTAATATAATACAGTTATACTCACGTACAAAAACTCTTCTACCCAACCAG
AACTATATNGTGGAGGCTCGGCGTAGGGCTTCTGCTGTGCGGTAACATTGCAAATGGAATAAGAGAGTGGAGTGCGAGAGGAGACGACATCGAGACTGTA
TGTCTTTTGTATGCGTGCTCTACCCTCCTCCTATCTGAAGGTTTATCTTCAACAGCTCTTACACTACGCACACAAGAAACACGCGAAGATGCTTTTTAAG
CTCTCAAGGAGGTCGGTCTACAGACGGTGTCTGCGGACGTAATGCTACAGCATTATTAGTTTTTTATTCTGATTGGTTGTGTGGCGGTAGTGTGATGTTG
TGGGAGATGTAATCAGGTATTTGGTATATAGTGCGTGGTGTTCGAAGTGCTTCATATGAGGATCTTACTTACGGTGTGTTTATGATGATAATACTTGTAT
TCTTGTGCAGTTGATCTTCTCTAACTGTGAGCAGCGCCAGACGAACGAGCATGGCAGATACCAAGCGAGGACCAAGCCTAGTATAGACTGATCTGATGCA
CATGACTGCACATGAGAGCAAACGGAGTTAGCGCGAAGAGGGAACGAGTGAAGTAAGGCAACTAAAGTGATCAGACGGTCAGAATAGAG
>LE_HBa0151P04_T7_200416 (trimmed for quality and cloning vector)
TTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.08573
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0151P04
Clone
Clone name
hba-151p4
LE_HBa0151P04
P151P04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found