Clone Read LE_HBa0161B22_T7_201296

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0161B22_T7_201296
Primer
T7
ID from Seq. Facility
LE_HBa_161_B22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
122 trimmed for vector and quality, 855 raw
Sequence
>LE_HBa0161B22_T7_201296 (raw untrimmed)
CCTCTCCTCCGTGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAATATAATATATTAATTCGCTCCCTTTTTATTCCAAACCTTAAGTGATTTA
ATTGTAAAAATCCCTTAAACAGCAATAATATCAAGTTGGGTTGGTGGGGTTGATGGGCAGGTTAATGGATTGAATCCTAAACTTTCTTTCCCTCATATTT
CTCCCTGTCCAGCCTCCCTCTCTCTTTTTCCTCCTCTTTTCCCTTCTTTTTCTTCTCTTTTCTCCTCTCTTCCTTTCCTTCTCCTCTCTCTCCCTCTCTT
TCTTCCCCCACCCCCTTCCTTCCCTTTCATTTTTTCTTCATTCCTTTTTCTTTATTCTCCTTCCCCTCTCTCCTCTTTTTCCTTCTTCCCTTCTCTTCTC
TTTCCTCCTTCCCTTCCTTCTCTCCTCCTTTCTTCCCTCCTCTCCCCTCTTTCTTTCTTTCTTTCCTTACCTCTCCCTTTCTTTTTTTTTTTCCCCCCCC
CTCTCTCCCGTTTCTCTTCTTCTTTTTCTTACCTTTTCTTATCCCCTTCCCTACCCTCCCTTCCCCTCTTTCTCTTTCCTTCCCCCACCCCTCACTTCTT
TTCTTTTTTCTCTTCCCCTCCTCCTCTCTCTTCTTTTTCCCTCGCCCTCTATCCTCCTTTTCCTCTTCTCCCTTCTCCTCCTCCCCTCCCTTCCCTNTTC
CTCCTTCCTTTCTCTATTTCTCCATTCCCCCTTCTCCTTTCTTCCCTTCTCTCCCCTCATCCCTCTTACTTCCCTTCTCTCTTTTCTCTCTTTCCCCTCC
CCTTCTCTCCTCTTCACCCCTCTTCTTCTCTACTCTCATCTTTTTCTTACTCCTT
>LE_HBa0161B22_T7_201296 (trimmed for quality and cloning vector)
AGCTTAATATAATATATTAATTCGCTCCCTTTTTATTCCAAACCTTAAGTGATTTAATTGTAAAAATCCCTTAAACAGCAATAATATCAAGTTGGGTTGG
TGGGGTTGATGGGCAGGTTAAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.921816
Expected error %
6.94466
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0161B22
Clone
Clone name
hba-161b22
LE_HBa0161B22
C12HBa0161B22
P161B22
Clone type
BAC
Contamination
none
Estimated length
121,404
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found