Clone Read LE_HBa0161C23_T7_201346

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0161C23_T7_201346
Primer
T7
ID from Seq. Facility
LE_HBa_161_C23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 616 raw
Sequence
>LE_HBa0161C23_T7_201346 (raw untrimmed)
TTCAAAGGCAAACCAAACGATATAAAGTAGAGGGGAAAAGCAAGATATTGGGCATGAAGTGCAGAGAAGGAAAGGAAAAACGGAAACACGATACAAGGCG
ACGATAGACGCTCCCTTTAAGAGGGCCCCANCGCGAGAGGTGGGGAAATGAAGAGAGACATGGAGACCCCTTTTAGGGGGGCGAGCCAACAACAAAGAGA
AAACGGAGATCTTTTAGTGTTATGTTAATGTTGTGAGAATCATTGCATGGGAGGTATTGTCTTGTTGTTTGTTTCTTTTTAGATATTTATTTTCTTTTTT
TATTAGTATGTTGTTATTTTTGGATAGAGAGTGAGGGAAACATGTATGGTGCTTATAATGATATGTTAATTTATTTAATATGATTATAAGATGATTTTTT
TATATGGATATGTAATAGAAGACTAATTAGGTCTGAACGACGTCGTCTGAACAAACATTTTTTTGTTATATGTTGTTTATATGTTTTATTT
TTATTTTAT
TTTTATTTTATCGTATAATATCTCTTTTTATTTTTTTTTTTTGTTTGTTTCTGTTGTTTTATTTGTTTTGTTTCCGATTATCATATTGGTGTTTGTGGCG
CGAAGATGATTGACGG
>LE_HBa0161C23_T7_201346 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.18961
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0161C23
Clone
Clone name
hba-161c23
LE_HBa0161C23
P161C23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found