Clone Read LE_HBa0180E20_T7_204392

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0180E20_T7_204392
Primer
T7
ID from Seq. Facility
LE_HBa_180_E20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1340 raw
Sequence
>LE_HBa0180E20_T7_204392 (raw untrimmed)
AGAACACTCGAGATTCTTGATATACACTCCGGTGCCCGGCGGCGGCTAGCTGACTATTTAGGTCACTACCCATGCCAAATGTCATCGGCTAGAGCTATTG
TATGGTAAATTGAGTATCTCACTATTGTGACTGCGCCTCTTTACTAAGTACGACGAGATGGTNCACATAACTGGATAGAGATCATTTCGAGCTAGCATAG
CTGACTCGCCCTATTTACAGAATCTTGACACGTTCCAAGAATTATCTTTCATGCTGCGATGGGTCATATTGATAACTACCATCTGTGAGATGCGCTTACT
GCATTTCTAAAATATCTCATGGAAGCNAGACGCAATCACATAATAGCACTAATGCGTATTCGCATGACCAATGCTTTTAGAATCTCTACACCACTCCGTG
TAGAGATTTACACGATGTACGTCTACCATGATGCGAGTGTCTACTCATTACTATTCATCTACTTCTATTATAACTTGTGAGTCTGTAGACTATCCGCCTG
ACTAGGTACGGGATAATTATCAAATCAAAATATATCACATGTCCTTCTGCACTTGAAATACTAATGACTAACATCTAATCCTACGTAGATGGCTACTAAT
AAGCATGTTAATATCATCGACAATATAACATACCATGGCAGATTAAACGAGACGGTGCAACACTTCGCTCAGATAATTTTCACTGAGGGACTTGTCTTAT
TCCTGTATGTATATACTACTATATCAGAGTAGACTCAAC
AAACTAGTTAGAAGGATTTACATAAAATTACCTAGACACTTCACCTTATGCGTATTTACAT
ACACGTCCTAAGTATAATTCTATCCATGACTTAGATCACCTAATGCATTATTCGAATGTGCCATTTACGATAAAATGATTAGATCNTATCATGAGTGACT
CTGATTCTTACTACCATGAGAAATAGTGATTACAGTCGCACACTCAGACCTTCATAACCATATGTTATCTATCGAGGCTATGTATAGACCTTGGCCTGCT
TAATGTTCTCGGGTACGTCTCTGGAGTAATGAAGTTTTTATGCTATTATTCAACTTACACTTTTAAGGAGCTCATCGTACACTCTCTGGATGATACATGC
TAGCTTCACTCTGACAATCATGAATCTATCACATATGAGTCTTCTACTGATGTTTAATCCTACACGTCTCCCTTATAACATAAATTACACTCATTATCCT
ATTAACATATCATTAATCCTATTTAATATTATCCTCTTTCGTCACACTTTTCACGCGCTTTTTATTATCTTAGTATGTATCTATCTACTTATCTTAAGTT
TGTATTACTTTCATTCTATTCTTACCCTTATTTTTATTTT
>LE_HBa0180E20_T7_204392 (trimmed for quality and cloning vector)
AAAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.855688
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0180E20
Clone
Clone name
hba-180e20
LE_HBa0180E20
C12HBa0180E20
P180E20
Clone type
BAC
Contamination
none
Estimated length
67,235
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found