Clone Read LE_HBa0080H20_SP6_20726

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0080H20_SP6_20726
Primer
SP6
ID from Seq. Facility
LE_HBa_080_H20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
703 trimmed for vector and quality, 774 raw
Genbank Accession
Sequence
>LE_HBa0080H20_SP6_20726 (raw untrimmed)
AAATAATTCTCCGCGGCTTTACAATTCTTTTATTGGAAAATATNGATATAAAAATNTGGCTAATTACTAAGCTATACCAAATTAAGAATGACCAATGTAA
CTCAATAAATTCTTAACCAAGGGTATGCCAATAATTGGGACAAGTACAAACATACCCTATCAAAATTAACTATGAATATAGTAGTACATTGAATAAGTTA
ATAACTTTCATAAAGAATGGTATAAAGTTATGAAATGACATTGAGCAAGATAACGTGGGTAATGATATAATTAATGCTTATGAGTTATGAAAATCACCAG
AATGGGGTGCATAAGGATGCGAGACAAGTCTCACTTGCACCTAAACAATTATGCTAAAGATACTCACATAAGAGGGCATTATAAATCGTGAGACAATTCT
AACTAACACCATAATGATAATGTAAGTTCTAAGTTCATATATATCAAGTAAAGAAAGGGATTAAAACTCATCCATTTAGTAAATCATACCTTCTATTAGA
AGCAAGCTTCCATAATGTATGAGTCAATTCTAAAAGTTAAAATGTATAAGAAATTTAGCAAAGTACCGATAGACTAGCAATGAGCTTGTGCAAGCACATA
TAAGCCTGATGAGATGAGACTACCAGCAAGGTGGATAAGTATCTCAAAAATCTCCTAGTCTTTGAACTATGTTGCCCGCATGGGGAATAGCCGGTGGATT
CCATCTAAGAGAGCTAAGTGGTATTCGGTTTCACTTTGGTAGGTGTACGACCCATTTTTAGTATGGGGCAGACA
>LE_HBa0080H20_SP6_20726 (trimmed for quality and cloning vector)
GATATAAAAATNTGGCTAATTACTAAGCTATACCAAATTAAGAATGACCAATGTAACTCAATAAATTCTTAACCAAGGGTATGCCAATAATTGGGACAAG
TACAAACATACCCTATCAAAATTAACTATGAATATAGTAGTACATTGAATAAGTTAATAACTTTCATAAAGAATGGTATAAAGTTATGAAATGACATTGA
GCAAGATAACGTGGGTAATGATATAATTAATGCTTATGAGTTATGAAAATCACCAGAATGGGGTGCATAAGGATGCGAGACAAGTCTCACTTGCACCTAA
ACAATTATGCTAAAGATACTCACATAAGAGGGCATTATAAATCGTGAGACAATTCTAACTAACACCATAATGATAATGTAAGTTCTAAGTTCATATATAT
CAAGTAAAGAAAGGGATTAAAACTCATCCATTTAGTAAATCATACCTTCTATTAGAAGCAAGCTTCCATAATGTATGAGTCAATTCTAAAAGTTAAAATG
TATAAGAAATTTAGCAAAGTACCGATAGACTAGCAATGAGCTTGTGCAAGCACATATAAGCCTGATGAGATGAGACTACCAGCAAGGTGGATAAGTATCT
CAAAAATCTCCTAGTCTTTGAACTATGTTGCCCGCATGGGGAATAGCCGGTGGATTCCATCTAAGAGAGCTAAGTGGTATTCGGTTTCACTTTGGTAGGT
GTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.945087
Expected error %
0.538486
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0080H20
Clone
Clone name
hba-80h20
LE_HBa0080H20
C02HBa0080H20
P080H20
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found