Clone Read LE_HBa0080O24_T7_21071

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0080O24_T7_21071
Primer
T7
ID from Seq. Facility
LE_HBa_080_O24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1447 raw
Sequence
>LE_HBa0080O24_T7_21071 (raw untrimmed)
TAATGTAATTGATAGTGTAGCGTATTGGTTTAGGTAGATTAGTATTGTATGGAGGTAGATTCGGNGGAGTGGGGTGTTGACATAGGCTAAGGTGGAAATA
TAGTACACCTACATCCCCTGCTTCTCTCTCTTTATTTAGAGAGGGAGACATCGGTGATCAATACTCTAATAAATTTGANTTTGTATATTTATGGTGTCCT
CCTATTTATGGAGCGTGATAATACTCACCTCGTCCCTCATACCGCCGCATAGATGGTTAGCGATATTAATGAAGTAGTTTACGGACAAAGGGTCTGCGCA
GACTGATGTCAGCTACTGTCCATAGCAGTNACTGGTAGCTTGTAGATGCGGCATCTTTTACCCTTAGTGTGTGGCAGTANGTTCCTGTGATGCGTGAACA
CCGGTACCTACTACCTGATATTCACGTTAGTCATTATTACCTATGGATCTGGCTCGGATAGCTAGATTTGTATGTGATCGGACTGTGCATGNTCGGTGCA
ACGGCATGCATGAAACTGATATTAAATGNGTCGTTCTGCTCCTGTGGTCATCTGTTATTAGTTTTTGATGATGAGAGGAGGGCTATCATGAAAGGACGAG
ATGAATGATGTAGACAATATACACTATGATCAAACATATTTGTGGTGTCGAGTCTAATGCGGGGAAAAACATTGTAGATGAAAAGCGTATATACGTATTG
ATAAANAGTANTTGTTATATGATCGGCGCATATATTCTTTATTTTCTTTTTGTTATTTTGTATAGTGTTATGTCAATATATCAGATGGTGAATGTATTNG
ATTGGTGGGAAACTAGTGAATGGGTCGATCAGTGTGCGCTCGCGCGACACTGCGTCTTGTGNGGCCCATTAATGCCATTTATAATACATGGTGCTGCTGT
TGCTGCACCTCTGACGACCTAGTAAGGGCACTAAAGAATGAGGATTATTATATGATGAAGTAGCATCACTGTGCTCTAGGATGTGATGTTTTGTATGCTG
CATTAGCGGTCTCTATGTTGTCACGGTACGTGCGTGTTTGTATTCTTTCTTGTGAGTGTAGCCTTAGACTTCTTCGTTGCTACTGATTGACTATGTAATA
TGTGCAGTTGATAGCAATACTCATGTGCTGATATACGATGAGTGTGAATTCGTGTNGATGACGTGATAGCTTGTANGATGTACGCGATGTGTAGATACTG
TNGCCTATCCGATTTGATGCATATGCTATATGAGTATTCTGACGAGATATTATTGCACTTTAGATGTGACATACAGATTCGGTCACAATATGATGTCACA
TCGCTTGTGATCTCGTATGATAAGCGTAGTGGAAGATTGGTTATAGATCTTTGCGTTCTGAACAAATAGCAGTGAAAGAGTCTGATGAGACATTTAACTA
TTGGGAATAATGCTGCGAATGATTATACTGATTGAACTATAGTTGTG
>LE_HBa0080O24_T7_21071 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0080O24
Clone
Clone name
hba-80o24
LE_HBa0080O24
P080O24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found