Clone Read LE_HBa0086D03_SP6_23572

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0086D03_SP6_23572
Primer
SP6
ID from Seq. Facility
LE_HBa_086_D03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
645 trimmed for vector and quality, 894 raw
Genbank Accession
Sequence
>LE_HBa0086D03_SP6_23572 (raw untrimmed)
AAAATTAAAATGTAACTTATCTTTAATTGTAACATACTATTTATCAGAATTGACCCCCCTGTGCAACACATGTGTCAATGCACTAATAACTAGGATACCC
TATACAAAATTTTAAATTTAGACAAATAAAAATTAAATTATACAGATTTTAAATTTATACAAATTAAACGAATAATAAAATTTAAAGATATTATAACCAC
AAATTGCAATTCTTTTAAACGGTAGGTATAGTACCTAATATAGGTTTCATGATTTCCCCTAAAATTAATAAATTAATTAATATCTAAAAGTATAACTTTG
AACTTAGCTCATAACCGAACGGCCCTACATAATTCTCGTCCATCTTTGACGCAAGAATCTTGTGAACAAATATGTAATGTCATAAATTTGTTGTTGTTGC
CCCCTACAATTTAAACAATAATACCAAAGAGGGAAACAAAACGCCCCCACAGTTTATAAAAACTAACATATCCACCCTGCCAGTTTTCTTCTTCACTGTT
TCTTTTATCTACAAACAACCATTTCAATTTTCAACACTATTGACTTCACGAGTCGCACTTTCTTTTTTTTTTGTTTCATCCACTACCCAGCGCAATAGTG
TGGGACGGTCCTTTTCTGTCTCTTCTCCAGTTTTCTCTCTCTACACACACGGCACAGTTATGGTGTCATTGTGATAAACAGTAGAGAGTTGGTTTAAGCT
TTCATGGAAATAAGTAAGAGAGAGAACGAAAGTGTGCATCGCTTCCAAGGTAAGCTATTATAGTTAGAGAGAGAAACAGATTTCTCCATTCCAAACCCAT
CCCTCCCCCCAAAAGTGAAATCCCGAGAAAAATGCTCTGTTTTTATCCCCTACTTTTAGATCTTCAATAAAGCTGAAATCAACGTTGTTTTTCC
>LE_HBa0086D03_SP6_23572 (trimmed for quality and cloning vector)
ACACATGTGTCAATGCACTAATAACTAGGATACCCTATACAAAATTTTAAATTTAGACAAATAAAAATTAAATTATACAGATTTTAAATTTATACAAATT
AAACGAATAATAAAATTTAAAGATATTATAACCACAAATTGCAATTCTTTTAAACGGTAGGTATAGTACCTAATATAGGTTTCATGATTTCCCCTAAAAT
TAATAAATTAATTAATATCTAAAAGTATAACTTTGAACTTAGCTCATAACCGAACGGCCCTACATAATTCTCGTCCATCTTTGACGCAAGAATCTTGTGA
ACAAATATGTAATGTCATAAATTTGTTGTTGTTGCCCCCTACAATTTAAACAATAATACCAAAGAGGGAAACAAAACGCCCCCACAGTTTATAAAAACTA
ACATATCCACCCTGCCAGTTTTCTTCTTCACTGTTTCTTTTATCTACAAACAACCATTTCAATTTTCAACACTATTGACTTCACGAGTCGCACTTTCTTT
TTTTTTTGTTTCATCCACTACCCAGCGCAATAGTGTGGGACGGTCCTTTTCTGTCTCTTCTCCAGTTTTCTCTCTCTACACACACGGCACAGTTATGGTG
TCATTGTGATAAACAGTAGAGAGTTGGTTTAAGCTTTCATGGAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938157
Expected error %
0.262748
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0086D03
Clone
Clone name
hba-86d3
LE_HBa0086D03
C03HBa0086D03
P086D03
Clone type
BAC
Contamination
none
Estimated length
104,408
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found