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Clone Read LE_HBa0089A22_SP6_25002

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0089A22_SP6_25002
Primer
SP6
ID from Seq. Facility
LE_HBa_089_A22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
417 trimmed for vector and quality, 1199 raw
Genbank Accession
Sequence
>LE_HBa0089A22_SP6_25002 (raw untrimmed)
GGCAAGATTTTGGGAGTTCGTACCGGGTGATAAAGGATAAAGACTTCGATTCACGAAGAAATTTCTCGGTGAAATGCCCAATAGCACTCAAATTATAGCC
CGAAATGAGCAACACGAAGAATTAGATTATGGACTATTTGATCATATGATAAGTAAATACAAGCCATCGCCAAAGAAGGGCTGTAAGAATCACTCTCCCG
TTGTTTACTGATTGGAAGGAGTACTGGAGACCGGGGGATATTCAGCAGGCTTTCAAGTTCCAGCGAGAAATGTCTATTTCATAAGTTAAAATTGGCATCC
ATATTAGAAGCTATCGGCAGTCAAATTCATCGAGAAGATGGGGATTCAAAGAGGAGTTCCATTAAGAATGATCAGTTGATGATATAACAATTGATCGTGC
TTGAGACAAGTGCTAAAGCATTTATCGATCAAATGTTCATAGACATGCAGTATATGCACTTTAGTCGCATCAGCTATGAGTCCGAACAACTTGGCAATGT
ATTATTCAAGCCAAATGAGTGAGACTTTTTTGCTTATTCAGCTCCACAAATACGATTTCTCTCCAATGCCATTTAGAAGGAATGTATAAGAATTCATAAA
TGGGAGGATTATGGTTTTTCTTGAAAACCTTCCTTACAAAGAATTCCTGAAATTCCACCTTCTTTAGGCCTAAAGCAAAAATCCCCGAAAACATTGCCAA
AAAACCGTTGGCAAAAATTGGGCTTAGAAGATTTTCTGACTCAAAGTTTCCCTTCCTTTGAAGTTTAACAGGCACTTACCCCGNGTCTGCCCTGCTTTCT
TTTTCAACATTAGGATGGAAACATAAAAGCGCAACCAATCCAAAAACCGCATCAACAAATTCCACCCCCCCCCCAACAAAAATAGACTGAACCGATCCAC
AACGTTTACATTCGATTGTTACTCGCTCTCCTCATGTTACACAGCTCCTAACCCTGTATACGTGCTTTCCGTATTAACTCATTTTCTTCACTTGCCCATG
TCACCTTCTAGCAGCTCTATGCTCCGCCCAACCCGCTCTCCTCCCTAAGCTCAAAGCAATATGAGGGGCGACTACTTGCCCTTTTGATATGACTTTTATT
TCCAATATTATTTTTAAACATCATACTCTTGTATAATTCGGCTGCTTCCTTTCTTCCTTTCGTTTCATCTGCCTTTTCGTTTTCATTCTTTTTTGCTCT
>LE_HBa0089A22_SP6_25002 (trimmed for quality and cloning vector)
GGTGATAAAGGATAAAGACTTCGATTCACGAAGAAATTTCTCGGTGAAATGCCCAATAGCACTCAAATTATAGCCCGAAATGAGCAACACGAAGAATTAG
ATTATGGACTATTTGATCATATGATAAGTAAATACAAGCCATCGCCAAAGAAGGGCTGTAAGAATCACTCTCCCGTTGTTTACTGATTGGAAGGAGTACT
GGAGACCGGGGGATATTCAGCAGGCTTTCAAGTTCCAGCGAGAAATGTCTATTTCATAAGTTAAAATTGGCATCCATATTAGAAGCTATCGGCAGTCAAA
TTCATCGAGAAGATGGGGATTCAAAGAGGAGTTCCATTAAGAATGATCAGTTGATGATATAACAATTGATCGTGCTTGAGACAAGTGCTAAAGCATTTAT
CGATCAAATGTTCATAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957877
Expected error %
2.43268
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0089A22
Clone
Clone name
hba-89a22
LE_HBa0089A22
P089A22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found