Clone Read LE_HBa0089B17_SP6_25040

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0089B17_SP6_25040
Primer
SP6
ID from Seq. Facility
LE_HBa_089_B17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
706 trimmed for vector and quality, 918 raw
Genbank Accession
Sequence
>LE_HBa0089B17_SP6_25040 (raw untrimmed)
GGGGGGCCTTTGAGGATCAACTTGAGTCTCGAAAAGAGAAAATGTGATAACTANTTTTGAGACGAAAAGCGCGTAAACCATTCGATTATCATTATTTTTC
TCTTCTGTCGAGGAAATTGTTTGGCCTATATATGTTTAGTTTTTGATCAATGATATATGAATGAAGTCAATTATTAGTAGCACAATATGGAAAAAATGAA
GTTATGAGGAAGACAAGTAATATTTTTTAGAGTCAAAGTGTGAATACAGATAGTAAGATTCTCAATTAACTTTATATCTATTTTTAGCACTACAATATGT
GTGGTATACTTGTATTGGTAGACCAAAAAAATCAAAAAAACAAACGCAAATATTGACAATTTATTGTCAAAGATGCTAATAAAATATTAAAGTTACTAGA
AATTCAACGAAATGCATGCGATTGGACAGTTTAAAAGGTTTGATATATTTTTGAATATTACTCATATTTATCTTTATTATTATATAACTTACAAGTACAT
ATATCATTTTCTTCTGATAGACGTGAAAAAATTAATTTTAACTCAAACTTTTAATTACTTTTTGACAAAAATATAGTCCATATATATGGGTATATTTTGA
TCCTCATCACACATATTTTTTTTGATTTTATGTTTCAACTTCTAATTTAAATTTATTATTTTGATAGTCAAATTTATTTATGTTTCACTAATTTTCTTGT
AAGATTTATTATAAATGTCTAATTTAAATTTATTATTTTGATGGTCAAAGATATAAAGTCATCATCATAACTTTGCAATTGTTCTATTACTCCACTAAAC
CATTTTGAACATATTTAATATATTATTTTTTTTCCATCCCAAATTTTATAAAGCAAGGTGTATTCCCCCTTCAACCCCATGAACTAATAGGGAGTAACAA
AAAACGTCCTTAAAACAA
>LE_HBa0089B17_SP6_25040 (trimmed for quality and cloning vector)
GAGTCTCGAAAAGAGAAAATGTGATAACTANTTTTGAGACGAAAAGCGCGTAAACCATTCGATTATCATTATTTTTCTCTTCTGTCGAGGAAATTGTTTG
GCCTATATATGTTTAGTTTTTGATCAATGATATATGAATGAAGTCAATTATTAGTAGCACAATATGGAAAAAATGAAGTTATGAGGAAGACAAGTAATAT
TTTTTAGAGTCAAAGTGTGAATACAGATAGTAAGATTCTCAATTAACTTTATATCTATTTTTAGCACTACAATATGTGTGGTATACTTGTATTGGTAGAC
CAAAAAAATCAAAAAAACAAACGCAAATATTGACAATTTATTGTCAAAGATGCTAATAAAATATTAAAGTTACTAGAAATTCAACGAAATGCATGCGATT
GGACAGTTTAAAAGGTTTGATATATTTTTGAATATTACTCATATTTATCTTTATTATTATATAACTTACAAGTACATATATCATTTTCTTCTGATAGACG
TGAAAAAATTAATTTTAACTCAAACTTTTAATTACTTTTTGACAAAAATATAGTCCATATATATGGGTATATTTTGATCCTCATCACACATATTTTTTTT
GATTTTATGTTTCAACTTCTAATTTAAATTTATTATTTTGATAGTCAAATTTATTTATGTTTCACTAATTTTCTTGTAAGATTTATTATAAATGTCTAAT
TTAAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.897794
Expected error %
0.463183
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0089B17
Clone
Clone name
hba-89b17
LE_HBa0089B17
C08HBa0089B17
P089B17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found