Clone Read LE_HBa0159D05_T7_254970

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0159D05_T7_254970
Primer
T7
ID from Seq. Facility
LE_HBa_159_D05-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
63 trimmed for vector and quality, 919 raw
Sequence
>LE_HBa0159D05_T7_254970 (raw untrimmed)
CGGGGCACTCTGAGTCGACCTGCAGGCATGCAAGCTTGCTGCTCATGACAAATTCGATCATGGGACATGGTTTCACTTACCTTCACATAGACGAGTTGTA
ATACATTGGCCGTTTTGCTCGACCACAGAATCGCTTCATAACTGTTTGGGTTTGTCAAAGGTAGAAACATTTAAAAGAATATCATCCATCAAATCAAAGA
ACCTAACATTGGGAGTAATGTAATCGAGAAGCTTGACATGGTCAAGGCCTATGATAGAGTTTCTGAGAAAGATGGGGTTTGTTGAGGCATTCATTGACAT
GGTTTGGAGGGGCATGATAAACTATTGGTACTCTATTAGTGTCATTGGTAAGACATATGGTTCCTTCCACTCTACTAGAGGACCCAAAAAGGGTGACCCC
TTATATCCAGTTCTATTTATTTTATGAGCAGATGTACAATCGTGATCACTCAACATATTCCATAATCCCATACACTACCAAGGGTTATACATGGCAAAGA
AATCTTCCACAAGTGAATCACCTATGTCTTTGCAGTATCATAACTGCCTTCACAACTCTCGTAGTCAGCTCACTCATAAAGTTCCTATCACCGCCATGAA
CTACTATAAACACATCCTCAATCTTTTTGATATCATACAATAAGCTCTACTTCTAGCATTTCTTCCCTGCTCTTCCATTATCATATATTGCAAGGATTCA
TTACTGATCCACCTTCACATATATATTACCCCATTTTCTTTGCCTACTTCCATTTACATTCTTTCTATATTCATCAATCAATAATAAGGACTTCTTACGC
CACTGTTAATATCATTTCTACACTCAAATTTCCTCTATAACTTCTATCAATAACCTAATTTCTTTTTCTTTTTTGATTTAATTATCTGCAACTCTTCATA
CCTTAACTTGCTTTTTCAG
>LE_HBa0159D05_T7_254970 (trimmed for quality and cloning vector)
AGTCGACCTGCAGGCATGCAAGCTTGCTGCTCATGACAAATTCGATCATGGGACATGGTTTCA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.900853
Expected error %
1.86867
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0159D05
Clone
Clone name
hba-159d5
LE_HBa0159D05
C03HBa0159D05
P159D05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found