Clone Read LE_HBa0184H18_T7_257519

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184H18_T7_257519
Primer
T7
ID from Seq. Facility
LE_HBa_184_H18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
16 trimmed for vector and quality, 913 raw
Sequence
>LE_HBa0184H18_T7_257519 (raw untrimmed)
NNGGGGTTTNNNNNNNNACTCGTCCGGGAACTCCGTCATTCGACCTGCAGGCATGCAAGCCTTTGGAAGGCCGAAGTCGGACCCAACTGTTGCTCGCTCA
TTTCACGGGTCAAAGAAAGTTTACTGGATGAAACTGTTACCCGTTCTAAGGTGAAAACAACTTACCTTTCTCTAAACTAATTGATAAACTATGAAGTCCC
TTTTAAAATACACTACATACTCTCTTTTATTGTCAGCAACAATGCATCTGCCAATGGAGACGGAGCTGTAAAACAAAAAAGATATTTGTTTTATGGGTCT
TTAAGTCCTA
GGAGGGACATTGGGGGACAACTATATTTTGGAGTTGAAAACTGAGGGACCTGGCGCGTGCATTCACGCTGGAGTATTTGCTCGGTTTGTG
TGTTGTGATCACCATTGAAGTGTGTCGACACTACAGAAATATGAATTTCAGGACTTCATAACACACAAGTAAAATTGGAGTGAGTAACTGAAATTTTGGA
TAGACAGAGAACGAGTTCAACCATTTTCTCTGACATTAATGACACATCTTATTATAAATAAATACTCTTATTTACCACGATAACTTTATTTTGAATACAA
AATTATCTTCTACTTTTGCTTTTTGGGGAAAACAGATATTCTTGACTTATTCCCACAATAAAAACTGCCTATGTCACGATTTAAAATCACTTTGCACTTT
AGCCCAACACTTCTGATCTCCCCTATAGCACCCTTTTGGAGAACATCTGATATACTTGCCTTGGATGAGACCAAATCTTCATCATTCATTGTGTTCACAA
AGAAAACGTTCAGCTCATGTCGACTACTACCATTCCTTTAAACACCAAATCTCTATGACGAACCTCAACTGTGTTACGATAATTTTTCATCGTCCAGATA
TCAATGCAGTTGG
>LE_HBa0184H18_T7_257519 (trimmed for quality and cloning vector)
GGAGGGACATTGGGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.13353
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184H18
Clone
Clone name
hba-184h18
LE_HBa0184H18
P184H18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found