Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

Clone Read LE_HBa0184K06_T7_257567

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184K06_T7_257567
Primer
T7
ID from Seq. Facility
LE_HBa_184_K06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
739 trimmed for vector and quality, 912 raw
Sequence
>LE_HBa0184K06_T7_257567 (raw untrimmed)
ATATTANNNNNNGCACTGACGGGGATCTCAGAGTGACCGCAGGCATGCAAGCTTGCTGGACTTTATCAGCCATTCTTCAGCAAGTTGCATGTGAGTGATA
CAGCCACCTTTTATCTACAGTTGGCCATTGATTGGAGCCAATAGAAGTTAGAAGCTATCCATTTATAGGTTTGCACAAGCCACATATTAACAAGAACTAT
TTCTTATATCATAAGACTATATACCACACTGTATCAAGAATATGCAAGAAACAAACTGCAGATGTCACATCTCAAAGTATCGAGTGACTAATAAGATGTG
AACAGCTTACTGAGGTATTAGCCTATCAAAGTCTAGAAACTTCCCAAGCAGAGCAGAAAAGGTTCGAGAAGGATATGTTCCAAGACCATTACTATCATTT
GATCCCACATCATTAAGCTTCTTGATAGACAAGTCAGAAGATAGGGTATGCGATAGCGAGAAAATTAGACAGGGGAAAAAGAAAGAGAGAAAGAAATTTA
AGAAAATTCTAACGTCTTTGACACAAAGTTGTGAACTCTCCAAAGATATCGTATTAGATGAACAGATGATGAAGGAATATTAGTAGTATTAACATTTCAG
ATATATAAGATCAGCGCACAATTGATTAAACACTGGTATAGAATCATTGAGCATGTTCTTCCATCCTAGTAAATATTGATACCAAGCAGTGTTGTGAAAG
GCGATCGCCTCGTCGCCAATGGCAAGAGGGGAGAGGAGGCGATCTTTCATCGCCTTTTAGCTTTGTGGCAATGCGATCTTCAAAAGGCGATGGCATAACG
ATAAAAGGCGAGAAAGGCGTCGCCTTTTGTATTTTCTTAAAAAAGCAACTAATGTAGGGTTTGTTAAAAAGGAATTTAAGGGTTTTCAACTAGACTCCTT
CATACTAGCCAG
>LE_HBa0184K06_T7_257567 (trimmed for quality and cloning vector)
GGCATGCAAGCTTGCTGGACTTTATCAGCCATTCTTCAGCAAGTTGCATGTGAGTGATACAGCCACCTTTTATCTACAGTTGGCCATTGATTGGAGCCAA
TAGAAGTTAGAAGCTATCCATTTATAGGTTTGCACAAGCCACATATTAACAAGAACTATTTCTTATATCATAAGACTATATACCACACTGTATCAAGAAT
ATGCAAGAAACAAACTGCAGATGTCACATCTCAAAGTATCGAGTGACTAATAAGATGTGAACAGCTTACTGAGGTATTAGCCTATCAAAGTCTAGAAACT
TCCCAAGCAGAGCAGAAAAGGTTCGAGAAGGATATGTTCCAAGACCATTACTATCATTTGATCCCACATCATTAAGCTTCTTGATAGACAAGTCAGAAGA
TAGGGTATGCGATAGCGAGAAAATTAGACAGGGGAAAAAGAAAGAGAGAAAGAAATTTAAGAAAATTCTAACGTCTTTGACACAAAGTTGTGAACTCTCC
AAAGATATCGTATTAGATGAACAGATGATGAAGGAATATTAGTAGTATTAACATTTCAGATATATAAGATCAGCGCACAATTGATTAAACACTGGTATAG
AATCATTGAGCATGTTCTTCCATCCTAGTAAATATTGATACCAAGCAGTGTTGTGAAAGGCGATCGCCTCGTCGCCAATGGCAAGAGGGGAGAGGAGGCG
ATCTTTCATCGCCTTTTAGCTTTGTGGCAATGCGATCTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.965423
Expected error %
0.0512652
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184K06
Clone
Clone name
hba-184k6
LE_HBa0184K06
C08HBa0184K06
P184K06
Clone type
BAC
Contamination
none
Estimated length
95,160
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found