Clone Read LE_HBa0184L22_T7_257598

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184L22_T7_257598
Primer
T7
ID from Seq. Facility
LE_HBa_184_L22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
10 trimmed for vector and quality, 858 raw
Sequence
>LE_HBa0184L22_T7_257598 (raw untrimmed)
TTGTGTCGGGGATCCCTCAGTAACCTGCTGCCTGCTGCTTGCATACCATTGCGCCATTCCCCTCTCTTCTCTGCCTGTTTCGTTCCCCCATTACACTTAC
CTTCTAAACGAATTTGCCCTCATTTAACCTCCCACGAACCTTAAATATTATAGGAAAGCATGCATCCTGGCGTCTCAATATCACCGTAATGACTTATGTG
GCGCTATGCCCGTTAAACTAGTGGACTGATATCTTGCATCTGCAAAGTGACCACTTTTTTGGTCTCGATAACCGCTCTGAGGCAATGTTCCTCGTGCGGA

TGGATATAGAAGGTTCCTCTCTCTCATTATAAGGTAGAAGGTTAGGATGAGGAAGAATGTGGGATGTCATGTAACTCCGTACACACCTATCCTACGACTC
ATGCTTATTGGCTCCTTCATTTACCTTTATGTACATGTGTCAGATGGGTGACATGCTTCTGGTACTTTGGGCTCGCTCCAAATGTCATCAGATACTGCCC
TCTCATATCCTATCCGTTGCCCACTCCCTAGATCTTGTTGCTGTATGAATTGGAGATGGCTGGAGATGATCCCGCCTCGATGATTTTGCGTTTTGAGAGT
TAAAGTCGTTAAGTTGATGTATCTTATCCGACAATCATACATGCTCTACTCCTTTGCTTGGATTGTACTCCAAGTTTTTGGCTGCTAGTAACTTGCCTGG
GTATAGACGCATACTCGAGCTGCAAATCAGCCCTTTCGAAGGAGTTTGGCTTCTCCTGAAGATGTGCCAGCTGTCCGAGATTGTCCCTGTCAAGTAGTAT
GTGAAGATGTGACACCGCTTTCGCACAATCCCCATGAATCACATGTTGGCTTAGTGCG
>LE_HBa0184L22_T7_257598 (trimmed for quality and cloning vector)
TGGATATAGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.11315
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184L22
Clone
Clone name
hba-184l22
LE_HBa0184L22
C08HBa0184L22
P184L22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found