Clone Read LE_HBa0185H22_T7_257857

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0185H22_T7_257857
Primer
T7
ID from Seq. Facility
LE_HBa_185_H22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
11 trimmed for vector and quality, 935 raw
Sequence
>LE_HBa0185H22_T7_257857 (raw untrimmed)
GGGATAGGNNNNGCTATGTCGGGGATCTCTGAGTCGACTGCAGGCATGCAAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCATGGTC
ATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGC
TAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGAACCCCTTGCGG
CCGCCCGGGCCGTCGACCAATTCTCATGTTTGACAGCTTATCATCGAATTTCTGCCATTCATCCGCTTATTATCACTTATTCAGGCGTAGCAACCAGGCG
TTTAAGGGCACCAATAACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTG
TCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCA
GGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCCGGAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTG
CTCATGGGAAAACGGTGTAACAAGGGTGAACACTATCCCCAAATAACAAACTCACCGTCTTTTATTGCCATACGGAAATTCCGGAAAAACCATTTTCCGG
CGGGGCAAAAATATTAATAACGCCCCGCAAAAACC
>LE_HBa0185H22_T7_257857 (trimmed for quality and cloning vector)
GCAGGCATGCA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, short insert
Quality trim threshold
14.5
Sequence entropy
not recorded
Expected error %
1.36744
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0185H22
Clone
Clone name
hba-185h22
LE_HBa0185H22
P185H22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found