Clone Read LE_HBa0196B23_T7_258505

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196B23_T7_258505
Primer
T7
ID from Seq. Facility
LE_HBa_196_B23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 913 raw
Sequence
>LE_HBa0196B23_T7_258505 (raw untrimmed)
GAGGCTTGCAGCTTTGTTAACTCGCTGGCTGGCCCGGTTAGACTTGTGGGCCACCTTGGACGCGCTTTTGATGATATTGGAACTGGACTCTGTGCAACCG
GGCACTGGAGTGGTTCATTTTTTTGTCATGGAATTGGGGGTACCCCTTACTGCGACTCTCGATGAGGGTACGCTGGGCTACGAACCGGATTTCTGCGATG
AGAGTCCCAGATATGGTTACGATCCCTCGGACCCTGAACCTGCCCACAAAGGTCAATGTGATACACTTGCCGGACAATATCCAATGACTCACTTGTCCGA
TATTATCCCATCCCTCCCCCCGGGTTGGACTCAACATTCGCAATCTCGCCACTGCCTTCACAACTAGCAATACTCCCCCATATCGACGAGCCTTTCTACT
TGTAAAAACCATACTCTCCTCACAGACTGCTTTGACTGAACACGATGATTTTAGCACTAAAATATACTGCGTACAAGTCCTGTTATCACAAGTTGTTACA
GATCTTCAGGATCATTTCCGTGTCTCACTGAAGAATTATCCCAGTGAATCTGCCTGAAATCGCAGCTTCTCGGGGAGAGTGACAGCAAAAACCCAATGTG
CCCCGAATGTCTGCAAGTTTGATTCCTTAGACATTGTCACAAGGTGGTCTGGCACCAACGCCTTGGCCTTCATAACAATCGACCAAAGTTTTCCTGCTAT
CGTAACTTGTCCTTACCCCACCAACTATTCCTAACCCTCCCCAATACCACCCGTGGTCATTCTAAACTTGCTTTCCCCTAAAACCATAAATCCCTTAACC
TTTATCCAACAAATCTCCCAAAATTATTTTACCCCCATTTTACACTAGAGCAACCAGCTTACCCTTTCCCTTTTAAAACCCCGCCGCGAAACCCTTAAAA
CTCTAATCCCCTC
>LE_HBa0196B23_T7_258505 (trimmed for quality and cloning vector)
CTTTTG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.899769
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196B23
Clone
Clone name
hba-196b23
LE_HBa0196B23
C03HBa0196B23
P196B23
Clone type
BAC
Contamination
none
Estimated length
83,370
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found