Clone Read LE_HBa0196K21_T7_258718

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196K21_T7_258718
Primer
T7
ID from Seq. Facility
LE_HBa_196_K21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
14 trimmed for vector and quality, 974 raw
Sequence
>LE_HBa0196K21_T7_258718 (raw untrimmed)
CTGCGGTCGGAAATCTCGCAGACGACTGTCGGGATGTGAGCTTCATTTCACAGTTGCTTGCGCGCTCAGTTAACTTAGTCGATAGCCTTGTCATCCTACC
CTAAGTCCTCGGTTGACTACGAAGAGAGTTTTGAGGTACTTATATGACCCTCAAAACTATGCTGTATATTACAACCCATATCCCGTCGTGTCTTGAAGGA
TATAGTCATGCAAAAT
TGGATTACTGGGTCAACTAAAACAAAATTCACAAGCTGGATACCTTTTTCTATTGGTGAAGGAGCAATATCTTGGAAATCGTCC
GAACAAACATGTATGGCTCGCTCTACAATGGAGTCTGAATTCATTTCTTTGCGCAAGGTAGGAGAAGTTTGATGGCTCTGGAATTTCTTAAAAGATATTC
AAGTGTGGCCCATACCACTGGCCCCTGTATGCATACGCTGCGATAGTCTCGCTACAAGAGGATGGGCTCGAAGCTTTATGTATAATGGCCAGTCTCGTCA
CAGAGGACGAACACATAACTATGTGAGACAACTACTCTAGTGGACTTCTCACAATTGACTATGTGAAGTCCAAAGAAAGTGTGTCGTATGCACTTACTCA
ACGCCTAGCTCCAGAGGGAGTTGAGAAATCTGCTACGATATCTAGACTATGGAACAAAACAAGTCATAGTGGCGGGTAATCCATCTATGAGACTGGAGAT
TCCAGATCCATGGTCCAAGGCATTAAACAACGTCCTTCAAAATTTTTTAAACTATTCAGAAAAAGTATTTTTATTCGGCCCTTTTCCGTCGAGAAACGAT
GGTTTGATACCCGGTAAACACACTAAGGCCTTTTTAAGGGTTTCCAATTTGGGTACGGGGAATATCCCTTGGGGTTATTGTGGGGTACCCTCCTTTTAAA
AGCCGCTACCGCAATTGGGAAGTTTTAAACCCCTCGCAAGAAAAATTCCCTGAGCCCCCGTTTTTTTCCCCCCC
>LE_HBa0196K21_T7_258718 (trimmed for quality and cloning vector)
TGGATTACTGGGTC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.204607
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196K21
Clone
Clone name
hba-196k21
LE_HBa0196K21
P196K21
Clone type
BAC
Contamination
none
Estimated length
77,192
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found