Clone Read LE_HBa0196B03_T7_259612

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196B03_T7_259612
Primer
T7
ID from Seq. Facility
LE_HBa_196_B03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
63 trimmed for vector and quality, 961 raw
Sequence
>LE_HBa0196B03_T7_259612 (raw untrimmed)
CTCTAGATCGAGGGGAAGCATGCAGGTTAGTGAGTTGGTAGTCGGCCCTAGGAATGTCCACACCAGGAGTGGTACAGAACACCGAATGGGTAATTTTGGA
CTTTGACTGACCCCATTCATTGATGGCCTTTTCAGCTGCCTCCATCCCAGGGTTTGGCACTTCAACAGTCATGATTTCTTGCCGAATATACAAGGATGGA
GCATTGTATTCCAGGATATTAGGATTTCTTTTCAGAGATTTCTTCTGTTAAAAAAAAATCTCTTTTTGATTTCCGATCCCTCCCCCACAACAACATATTG
AAAATTGTAAACCAACATTAAGTTTACTAAATCATAATTAGGGAGTTTACCAAACACCACGTTAAAAAATGCTCCTACCTAAGAACGTACATAAAAGCCT
CAATATTTTATGCTTATACTAGTTTACCTTGTAAATTTCAATTTTCCTCTAGGTGAAACTGACTTAATAATAAAATCCCAAAATCTTCACGCAATTATCC
CCATTATTTCATTGTTTTCAAATCCCCTCAAACACTTTAAAAAGTGTCTAACTCTCAAACCCAAAACAGATTCCACCTTCCCTTACTCTAAAATGTCACC
TCCGAGATAAATTTAAAACCAAATCTCACTACATCCCCAACTCACTTCACCGCCTTCAATCTCTTCGGTACATCCACTCTTCATCAACTGATTATTTCTC
TCTCTCTATACACTAAACGTCCATACGTGCCCCTCACCCCTTCTCCCTCAAAAATTTCAACCATCCCTTCCTACCCCCCTCCATTCACTCACATCTGTCT
CGCTTTCTCATCCTCCCTGAATTTTCATCCTCATCCATTACACTACACTACACACTTTTTCTTAACCCAACATCACCAATAACTCTCTTCCTCGCCAATA
CTCATACTATAAAAATTACAAAACCTTCGCCCAACACAATTCACCCATCTCACATCTAATA
>LE_HBa0196B03_T7_259612 (trimmed for quality and cloning vector)
AACACCGAATGGGTAATTTTGGACTTTGACTGACCCCATTCATTGATGGCCTTTTCAGCTGCC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.901658
Expected error %
0.941671
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196B03
Clone
Clone name
hba-196b3
LE_HBa0196B03
P196B03
Clone type
BAC
Contamination
none
Estimated length
111,108
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found