Clone Read LE_HBa0140H01_SP6_260929

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0140H01_SP6_260929
Primer
SP6
ID from Seq. Facility
LE_HBa_140_H01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
701 trimmed for vector and quality, 960 raw
Genbank Accession
Sequence
>LE_HBa0140H01_SP6_260929 (raw untrimmed)
NGGCGATCGCACTGGGTCATGGAGAGCATATTAGAGAATATTAACAAGAGAGGTACTTCATTTGATGTTTTATGGAACTGAGTTCGTTGAGTATGTATGC
ATGCATTCATTGGGTGTTAAGTAGCTCTTCTTTGCCAAGAGTCATCAATTATCCTGAATACTCCCAGAAGCTAGTTGATTTCCCTTGATTCTCAAAGCAG
AAAGAGCGAGGAGATGTTGAAAATTTAGAAATTCATTCTAAAGGAGCTTGTCGTATTTGTAAAGGGCCACTTTTACTGCAATTACTCCTGGAGACTTTAT
GGGTCAGCACTATTTGATGGACTGTACACTTCCTTCAGACAATAAACAATGTTCTAAAACATTTTGGCATACTTTCTTGGGAATGATTTTGAAATTTTAA
GTTCATGAGGGTCCATATGTTGTTGGATAAATCATTAAAGAAACGGCAGTCTGGTTAAGCTTCCACTACTTGTGGAGTCCTAGAAGAGCTGGATCACGTT
GGATCTATTGTACACAGCCTAGACCCTGTTGCCATTTAAGTATAGTTTATCTCAAAATGTACGGTCTGTTGTGAAATTAAATTTTCAGAAGCATCTAGAG
CTTTGATCTAGTAATAGAAGTGCAGCTCGTGATGTGTAGGTTAGGTGTACGCCATGGGTTTGCCGCAAACATAAGCCTAGTTGTAAGTGGAAAAAGGGTA
GTGGGACTGGCCTTATCTACTGAGTTTAGAACCAGACAGTTCTAGCCCTCGAGGATTTCTTTTGTTATTAAAGAAAAAGTTACTTTCCCAAGAAAGAATC
CAGAGAAAAATAGGCCTACTTATTGACTTACTTGAGAACACCCCCTCCCCCTCATCTCTTCGGTCTCCATCTCAACTTTCCCTTTGGTTGGGGTTGGAAA
ATTGGGTGGAATTTAACCCCAATGTTTTTGGGAAATTGAACGGGGGCATTTTATTAATCC
>LE_HBa0140H01_SP6_260929 (trimmed for quality and cloning vector)
GAGAGCATATTAGAGAATATTAACAAGAGAGGTACTTCATTTGATGTTTTATGGAACTGAGTTCGTTGAGTATGTATGCATGCATTCATTGGGTGTTAAG
TAGCTCTTCTTTGCCAAGAGTCATCAATTATCCTGAATACTCCCAGAAGCTAGTTGATTTCCCTTGATTCTCAAAGCAGAAAGAGCGAGGAGATGTTGAA
AATTTAGAAATTCATTCTAAAGGAGCTTGTCGTATTTGTAAAGGGCCACTTTTACTGCAATTACTCCTGGAGACTTTATGGGTCAGCACTATTTGATGGA
CTGTACACTTCCTTCAGACAATAAACAATGTTCTAAAACATTTTGGCATACTTTCTTGGGAATGATTTTGAAATTTTAAGTTCATGAGGGTCCATATGTT
GTTGGATAAATCATTAAAGAAACGGCAGTCTGGTTAAGCTTCCACTACTTGTGGAGTCCTAGAAGAGCTGGATCACGTTGGATCTATTGTACACAGCCTA
GACCCTGTTGCCATTTAAGTATAGTTTATCTCAAAATGTACGGTCTGTTGTGAAATTAAATTTTCAGAAGCATCTAGAGCTTTGATCTAGTAATAGAAGT
GCAGCTCGTGATGTGTAGGTTAGGTGTACGCCATGGGTTTGCCGCAAACATAAGCCTAGTTGTAAGTGGAAAAAGGGTAGTGGGACTGGCCTTATCTACT
G

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.968973
Expected error %
0.0833283
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0140H01
Clone
Clone name
hba-140h1
LE_HBa0140H01
P140H01
Clone type
BAC
Contamination
none
Estimated length
27,194
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found