Clone Read LE_HBa0090I08_SP6_26126

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0090I08_SP6_26126
Primer
SP6
ID from Seq. Facility
LE_HBa_090_I08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
702 trimmed for vector and quality, 973 raw
Sequence
>LE_HBa0090I08_SP6_26126 (raw untrimmed)
AAAAAATTCCGGTTTTTTACAGCTAGCTACGTTACTCGTTCCGGTTATTTATCAGTGTTTTTATTATTTTGGATGGATCTCGTCCTGTATTCAGGTGATA
AAAAGTTGACCATGAGACTCATGGTGTTGACACCCCGGAAGATGTAGACAAGGTAGAGCAGTTCATGTGGGAGAGAAAGAAACTTGTCTTAAAGCAGAGT
AAGATTCTATTAGATGACTTAGTGTTGTCTAGAGCGACGTTGAGCTTTATGGAACCATCTCAATTGGAATTAGTGCACCATTGATATTGCTGAATTATGT
ATTCGAAGATGAAAGAACTTAGAAATAGGAAACAGTGTGCTACATGTATTTTTTTTCTTAGAGAAATATCAATAGTATTATGTACAATCATAATTAGCTT
GTGAAATTACCTCCAAAACAAGTTCGCAACTATATCTGTTTCAGAATGGAGATTGGGAAACTAACCACCGACAGGCGTCAACCAAGCAACAACCGTCTCC
GCCAGCTGCAGCAACCAATCAGCGGGCAGCAGGTGTTGGTACTACTGCTTCAGTGATCAACTGAACCTCCGTCTTGAACAGAAGAAACGAGAACGATTCA
AGTGAAAAATACACAAATCCACCAGGTGAATGAGTCACGAACGATCCAAAACTCTTCCCTACCACACAGTGCCATGCCGGTCCATACATCGAATCCAACT
CCTAAAAATCCACAAAAGTTTCCCCGGCGTCAAATTTTCAAATTCCAACTCAAATTTGAAAACTAGATTGGAAGAATCCCACTCACCTTTTTTAGGGAGC
GAGCCGGGAGGGAGGGATTAGGACGGTGATTCCAGGTTGGAGGAGAAGAATTCGGGCGTAACGAAGGGCTGTGTTTGCTGGGGAAAGGCTTTCTGCTGAT
TGACCTTTGGTAAAACTGATACCAAGAGCTGCAACTTCCTTCTTCTTCCGCCAACTAAATTCCAAGCCTTTTC
>LE_HBa0090I08_SP6_26126 (trimmed for quality and cloning vector)
CGTTCCGGTTATTTATCAGTGTTTTTATTATTTTGGATGGATCTCGTCCTGTATTCAGGTGATAAAAAGTTGACCATGAGACTCATGGTGTTGACACCCC
GGAAGATGTAGACAAGGTAGAGCAGTTCATGTGGGAGAGAAAGAAACTTGTCTTAAAGCAGAGTAAGATTCTATTAGATGACTTAGTGTTGTCTAGAGCG
ACGTTGAGCTTTATGGAACCATCTCAATTGGAATTAGTGCACCATTGATATTGCTGAATTATGTATTCGAAGATGAAAGAACTTAGAAATAGGAAACAGT
GTGCTACATGTATTTTTTTTCTTAGAGAAATATCAATAGTATTATGTACAATCATAATTAGCTTGTGAAATTACCTCCAAAACAAGTTCGCAACTATATC
TGTTTCAGAATGGAGATTGGGAAACTAACCACCGACAGGCGTCAACCAAGCAACAACCGTCTCCGCCAGCTGCAGCAACCAATCAGCGGGCAGCAGGTGT
TGGTACTACTGCTTCAGTGATCAACTGAACCTCCGTCTTGAACAGAAGAAACGAGAACGATTCAAGTGAAAAATACACAAATCCACCAGGTGAATGAGTC
ACGAACGATCCAAAACTCTTCCCTACCACACAGTGCCATGCCGGTCCATACATCGAATCCAACTCCTAAAAATCCACAAAAGTTTCCCCGGCGTCAAATT
TT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973251
Expected error %
0.239818
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0090I08
Clone
Clone name
hba-90i8
LE_HBa0090I08
P090I08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found