Clone Read LE_HBa0159H13_SP6_261624

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0159H13_SP6_261624
Primer
SP6
ID from Seq. Facility
LE_HBa_159_H13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1355 raw
Sequence
>LE_HBa0159H13_SP6_261624 (raw untrimmed)
CCTCTAAACAGGCACCCGAGGAAGAAGGGAGGGNGNNNNNNNNAGAAGAGGGANGTTCCTNTTACCAACCCCCCCAGAGAGAGGGGGNNAGGNNNNNNNN
NNNNNNNNNNNNNNNNGNNNNNNNNGNGANNNNNNGAATNTNTGGAANNNATNNNGAANTNTGNTCACCCCCCCCCCAATCCGGGAGAAAGGAGGTGAAA
TATATGATGGGTGCCTTAATCAGCTACTCGCACGGGGAAGGTAATATTGTAGGCCCCCAATTATAGGGCCCCCTCCCACCTCCCGTCTCAAGGCACAGCG
TTAACGCTGTACTGTAGTGTGATGATGTGCTGAGTAAAGGTCTTAGTGGAATGATCTTCTCTGTTATTATGCCCGCGTTCCACTAGAATGACTATCGGTG
AAAGACCCTGAATGAGATGTGTCGATCATTCCACTGTAGTAGTAGGTGGGTGGTAATGATGGTTATGAGTTATGAGTCACGTACTCCCTGCGACCGTTGG
CGTTAATGTAATTCATATTGTCGTTGGGTTCTCCTTTATTTCTAGTGTGTGAGCTCGTTTGACCCCGCTCTTCTCCTAGTGAGAACGTGAGGTGCGGTGC
AATGATAGATGAATCATGTACGTCTCGGTATCATATAATTTTTAGTGTCAATGGTTGATAGCGTGATGAGGTACTGTNTTGGGACTTGTAGGTAGGTCCT
GTATGCTATAAGAGACGTGCCGGGCGCTCATATTTTGTTGTGGACGCTATTCTGCGGGAGTAGTCACGTGCAGCTCTTGTCTGAATGGATGGTATGTTCT
ATGTAGTTGTTATAATTTTATGATGTCTACTCTTCTCTCTGTAGTTTAGGACATGCTTATCTGACTTGTTTGTTGTAATTTTGTATTATGTTTGAAAATT
GCGTTGTAGAGAGGATAGGATCAGTCTCCGTCTCTCTTTTGTTGTTATGTATAACCACGCCGCTTCTGGAGTTTATGAGCCTGGATCGTGATGTCAGATG
TGCATGTTCGTATTGACTGCTTCATGGAGATGCTATCACGATAATGATTTTGATTTACATCTGTGGAAGTCTGATAGTGTGGATGATGATGAGATAACGT
TATGATGATGATATACAAGTTTTTATGACATATGTCTACTGGATTCTAGTGTTTTGCTGACTTCCTTGTCTCTATCTCTCGTCGTATGTTATGTGATGAA
GTTGATTATCTTGTTGTTGAAAGAGGGATGTGTGCGATCTATGTGTGCTAGTTTGTGATCGGGTCGTGAGTATTAGTGTTCGTACTGTGTTATAATTCTG
GTGATTTCTCTCATTAGTCTATTCTGATTGGTTCTATATGTATTTGTGTCTTTCN
>LE_HBa0159H13_SP6_261624 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0159H13
Clone
Clone name
hba-159h13
LE_HBa0159H13
C03HBa0159H13
P159H13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found