Clone Read LE_HBa0159O09_SP6_261911

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0159O09_SP6_261911
Primer
SP6
ID from Seq. Facility
LE_HBa_159_O09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
588 trimmed for vector and quality, 933 raw
Genbank Accession
Sequence
>LE_HBa0159O09_SP6_261911 (raw untrimmed)
NNNGGACTTGCCATCATTTTGCTCCGTAATCCCCAGATTTGTCCGAGTTATACCCTTAACGTCAGAATTGAAAAGAACTACTGGTGTCTTCGCTGAAACT
GCATGGGCTGGTGCTGCATCCTATTTGCTGTTGTACATGCTTGCTAGTCACGTAAGCTACTTATTAAGTTGCCGAAATGTTTGCTATCTGTTCTGCTAAG
ATAACTGTCCATTGCATTGTTTTGAAATGTAAATCTTCTTTTTTTCATTGGCATAATACATAAATGTGCCCTTTAATTTGGCTTCAAATCACATTCATGC
CCTTCAACTTTGGATGTGCACAATTAGACTACTTAAACTTGTATAAAGTTGAACAAATAGACACACATGTCCTACATGTCATTTTTTGTCTTACGTGGTG
TTCTACGTGTGTTGTGCCATGTAGGACTCATGTGTTTATTTATTTAAAAGTTGGATAGTTAAAGTGCCTATTTGTGCATTATGAAAGTTAGAGGTCAAAG
TTAAAATTTATAGCCAAGTTTAGGGTTCAATATATGTATTATACCATTTTCTTTTGTGTAAAATTCTCTTCTTTGCGGAAGTGGAAGTTCTGGTTTCCTG
CTGTATTCTGTCATTTTGCAAATCATTATGAGGGAAAATCTTTATAATATGAAATCTCTGTTTATAGCATCTTCATCGTCCTTTAGATGGATTGAAGCTA
AAACCGCAATCCGTAAAAGTAAAGTTAATTTGTAAATGAAACATTTTTCTTAAAATAGGTGTAAAACCTTATCCACAACTATACCTGTTGTATTGGTTTA
AAAAAAAATGCAGTGTACTTCCGGTTTCCGAGTTAATTGATAGTTAAATGAATTTGTCGTTTCTATTCCCAGTTAAAAAATTTTCACTGTTTCTCTTAAT
TCTTAGCCATATAGTTGAGTTTTTGTTTTAACA
>LE_HBa0159O09_SP6_261911 (trimmed for quality and cloning vector)
TCCCCAGATTTGTCCGAGTTATACCCTTAACGTCAGAATTGAAAAGAACTACTGGTGTCTTCGCTGAAACTGCATGGGCTGGTGCTGCATCCTATTTGCT
GTTGTACATGCTTGCTAGTCACGTAAGCTACTTATTAAGTTGCCGAAATGTTTGCTATCTGTTCTGCTAAGATAACTGTCCATTGCATTGTTTTGAAATG
TAAATCTTCTTTTTTTCATTGGCATAATACATAAATGTGCCCTTTAATTTGGCTTCAAATCACATTCATGCCCTTCAACTTTGGATGTGCACAATTAGAC
TACTTAAACTTGTATAAAGTTGAACAAATAGACACACATGTCCTACATGTCATTTTTTGTCTTACGTGGTGTTCTACGTGTGTTGTGCCATGTAGGACTC
ATGTGTTTATTTATTTAAAAGTTGGATAGTTAAAGTGCCTATTTGTGCATTATGAAAGTTAGAGGTCAAAGTTAAAATTTATAGCCAAGTTTAGGGTTCA
ATATATGTATTATACCATTTTCTTTTGTGTAAAATTCTCTTCTTTGCGGAAGTGGAAGTTCTGGTTTCCTGCTGTATTCTGTCATTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.946595
Expected error %
0.0857619
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0159O09
Clone
Clone name
hba-159o9
LE_HBa0159O09
C12HBa0159O09
P159O09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found