Clone Read LE_HBa0163L12_SP6_262223

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0163L12_SP6_262223
Primer
SP6
ID from Seq. Facility
LE_HBa_163_L12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 1050 raw
Sequence
>LE_HBa0163L12_SP6_262223 (raw untrimmed)
CTCTACTTTCAGTTCGGCATGCGAACTTACCCTCTTTTACATCGGTTCGTATCATTATACAACGTACAACATATTAATATCTTATGAGAGGGCCGCCACT
AAAAGATTCTTTCTTATATATGATTACCTCATCCATCTATACTAACAAGTT
AGTTTCTCATACATGAATTCCACACCAAATGTTGTTACTTAATCATGTG
ATACAATACATAACTCCTTTAGTTGTTACTATTTTCACTTCTCAATTGATGTACCCGATTTTATATACCAATAACCCTGATTTATCCTTAGATTCTCCAT
TACGAAGCATATATATATGCCTTAATAATCACTTCTTACTCATTCATACTATTGTTGTCTGACTTTCCTTCCACTAATTTATATTTCTATATCTAATATT
TCTCTCATTCCTTATCTTTGTAAAATATGAAATCCATTTTTATTTATAAATACACAATAAATCCTCTCACTACCCTTATCATATCCCTTCCTACATATAT
CATAAATTTTATACCTACAATTTGTACATATTCCCATATATTTAACTAATTTCCTTTCCATAAACCATTCTCCTCAGTATTCTTACTTATTATAATTAAT
GTATCACCTCATTAACAACTATTAATCTAATATTTTTCATTACCTATAATATAAACTACATCAATACATCTTCAATCCACGTTATACTTATTAATACAAT
TCTTTTAACACCTATTACATTTTTACTATATACATTACCTATTTCTATCTAAATAACTTTAATCTATCCTTCTCCCTTTATTCTCTTTATTTAATTAAAT
TATTCTATTATTTTATCTAAATCTTCTCTTATTCTTTATTCAATCACTTTTTCTTTTATAATTCTAACTATTAAAATCTTTGTATATTTATTCCTATAAC
TCATATCATTCTTATTTATTTCAATCATACAACTTATCATTTCCTTATTTTATATCTTTATCTCTCATTTCTCATTCATATCAATCATTCCCCTTTTTCC
TATCACTTTATCTACTTACCAGATTCTTATCTTAACAATATTATCTTTTG
>LE_HBa0163L12_SP6_262223 (trimmed for quality and cloning vector)
AGTTTCT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.878916
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0163L12
Clone
Clone name
hba-163l12
LE_HBa0163L12
P163L12
Clone type
BAC
Contamination
none
Estimated length
91,509
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found