Clone Read LE_HBa0175G05_SP6_263702

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0175G05_SP6_263702
Primer
SP6
ID from Seq. Facility
LE_HBa_175_G05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
611 trimmed for vector and quality, 1021 raw
Genbank Accession
Sequence
>LE_HBa0175G05_SP6_263702 (raw untrimmed)
NNNNCCGATCCTTTGGAGTCCTCGATTGGCGGTTCCTCATCTGTGGAGATTTCCTTGTTGTTTCCTTTGTCAATTGCACATAGTGAACATCTGCTCTTGA
GTGATCAGTACAGGAGACCATATGCCATTTCCACATAAGCTAAGTGTTGGATGTTTAGTGCAGTTCAACTAGTAAGCAGCACACCTTATGATGTCAATTG
TGACTGTACTGTTAACTACCTCATGCAAGTTTTTTATTTCTAGCGCATCACCGATAAGACACCCTTTCAGGACCCTTTGGAAACCATCCTCTGAGGTATT
GCTGTGGGTTGTACTTCACCTTGTTATAGTGATTATATAATTTAGCAGTCTTACATTATCTCCTCTGTTTCTATTCATTCAGGGCTAAATTCAGAAGACA
TATGTATGACGTTTTTTATGCATTGTTGAGAATTAGTTAGCTCTTTACACACTTGCTTCGGATTTGGTAGTTTCTAGAGACCTCTTCTTCACAATTCGTT
TGACTGAAGACTTGGTATCAGACAGAAGTGTTATTTGGAGGCAAGGGGCTAATGTGTTTTTGAGAAGAAAGGTTCTGTGACTTGGACATATAATTTGATA
TGTTGAATTGAGCTATTTGAATCTCAGTTAGCTTTGAAGTGGTATCATGATGCACTGCAGCACTTGCCCTTGCTTGCTTTCTCTCCCCTGTTACAGTTTT
GGCCTTTCATCTGCCATAAAATCTTACAAATAAGGCTGTGAAGCCCTTCCGTCCTATCATTGCTGAATTTGCCCCTTCTCATTTTTGTCAGAAGGAAATT
TAAGGGGGATTTTTGTTTAATCAACCCAGACCAAAATTTCCTTTTTAATTATTTTTTTTTCATTTCACATCCATGCCCAGAACAAAAAAAGCAATATTGT
TTAGGTGTGAGGTTGACCCCAACTCCCCAATTTAAAAAAAAGCCCACCCTTCCATTATGTAACCTGCTGAAAGTTAAAGAATGTTTGGGCCATCATTTAC
ACCTCATATTTTCTATTTTTG
>LE_HBa0175G05_SP6_263702 (trimmed for quality and cloning vector)
GGCGGTTCCTCATCTGTGGAGATTTCCTTGTTGTTTCCTTTGTCAATTGCACATAGTGAACATCTGCTCTTGAGTGATCAGTACAGGAGACCATATGCCA
TTTCCACATAAGCTAAGTGTTGGATGTTTAGTGCAGTTCAACTAGTAAGCAGCACACCTTATGATGTCAATTGTGACTGTACTGTTAACTACCTCATGCA
AGTTTTTTATTTCTAGCGCATCACCGATAAGACACCCTTTCAGGACCCTTTGGAAACCATCCTCTGAGGTATTGCTGTGGGTTGTACTTCACCTTGTTAT
AGTGATTATATAATTTAGCAGTCTTACATTATCTCCTCTGTTTCTATTCATTCAGGGCTAAATTCAGAAGACATATGTATGACGTTTTTTATGCATTGTT
GAGAATTAGTTAGCTCTTTACACACTTGCTTCGGATTTGGTAGTTTCTAGAGACCTCTTCTTCACAATTCGTTTGACTGAAGACTTGGTATCAGACAGAA
GTGTTATTTGGAGGCAAGGGGCTAATGTGTTTTTGAGAAGAAAGGTTCTGTGACTTGGACATATAATTTGATATGTTGAATTGAGCTATTTGAATCTCAG
TTAGCTTTGAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957647
Expected error %
0.0236662
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0175G05
Clone
Clone name
hba-175g5
LE_HBa0175G05
P175G05
Clone type
BAC
Contamination
none
Estimated length
98,035
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found