Clone Read LE_HBa0177F12_SP6_264138

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0177F12_SP6_264138
Primer
SP6
ID from Seq. Facility
LE_HBa_177_F12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
442 trimmed for vector and quality, 1012 raw
Sequence
>LE_HBa0177F12_SP6_264138 (raw untrimmed)
GGTCTTTGGAGTTCATGACTGTTGAGGTGAGGTTGACTTCATCGTTGCATGATAGAGATGAAGAGTCACAGAAATTCTGGGAAGAGTATTATGAATCTGA
TGCACTTGCCAAGATTGATTGATTATTCTGAGGAGTGATTCGTGGTGCCTTGGGGATTCGGATCTTTTCACTCTCATCATCTGCATCGAGTTGTTCTGAC
ATGTACCCAGCCAATGCTTCACTAATTTCAGCCTCCTGGTTGAGACTTGAAATTTCTGTGTCCTTCGTTAAAGGGTCAAAAGTGTTAGACACGATGAGGC
TGGGAGGTGCAGTGCCAACATATTTATTTTGGGCTAACCCTTTTGATTTCCAGAATGTTTTAGTATGTTGTCTTCTTTTTGGCCCATGTTTGTGATACTC
CAGCGGCCATTAAACATTGTTGAGCTTTGCAATTTTACCTTTATATGCTGAGGGTCCCACTCCATCTCATAATTTTGAAATTTCAGGTACCATCTTCATG
CTGCCCCATCCTGCCCTGTCATATAACTTTAGTGGGGCAGAAACTCGATGAATTCACTTTTTCCATTGATTATTTATTGTTTTCTACTCTTTGTTCTGTC
TTTTATAAATATCCTGACTCTTCTCATTTCTACTTAGTTCTTCTTTCTATCTGACTTGTTCTGCCTGATTAATTGTTTCCTTTTATTTAAAACCTATTGT
CATTTGTAATTGATTCTCCTTTTCATATTTAATGATCTTCTCTCAATTTATCTAATCTTTTTCTTATTTTTTTAAGTATTGATTTCTATTACTTTCATCT
TATTTCATTTGATTGCATATTTCACTTATTTTTTCTTTCTATTCTTCTCTGTATCATTATTTTATTATTCTTTTTTACTTAATATTCTTTGTACTTTCAT
CTTCAATATTTTTTTATCTTCTTTACATTTTCTTGAAGTCCTATGATATTTTATTTTTCTATTAAATGATTTGATTGATTTTTTACTTAACTTTATAATT
ATTCCCTGTAAC
>LE_HBa0177F12_SP6_264138 (trimmed for quality and cloning vector)
ATGACTGTTGAGGTGAGGTTGACTTCATCGTTGCATGATAGAGATGAAGAGTCACAGAAATTCTGGGAAGAGTATTATGAATCTGATGCACTTGCCAAGA
TTGATTGATTATTCTGAGGAGTGATTCGTGGTGCCTTGGGGATTCGGATCTTTTCACTCTCATCATCTGCATCGAGTTGTTCTGACATGTACCCAGCCAA
TGCTTCACTAATTTCAGCCTCCTGGTTGAGACTTGAAATTTCTGTGTCCTTCGTTAAAGGGTCAAAAGTGTTAGACACGATGAGGCTGGGAGGTGCAGTG
CCAACATATTTATTTTGGGCTAACCCTTTTGATTTCCAGAATGTTTTAGTATGTTGTCTTCTTTTTGGCCCATGTTTGTGATACTCCAGCGGCCATTAAA
CATTGTTGAGCTTTGCAATTTTACCTTTATATGCTGAGGGTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.960764
Expected error %
0.150121
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0177F12
Clone
Clone name
hba-177f12
LE_HBa0177F12
C02HBa0177F12
P177F12
Clone type
BAC
Contamination
none
Estimated length
120,583
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found