Clone Read LE_HBa0177N21_SP6_264491

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0177N21_SP6_264491
Primer
SP6
ID from Seq. Facility
LE_HBa_177_N21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
379 trimmed for vector and quality, 985 raw
Sequence
>LE_HBa0177N21_SP6_264491 (raw untrimmed)
TTAGATACTCAGCTTGAGTAGATCAATCAGATTATGTTGCTCTTAACTGCAACCACAGGAGGAGGTGGGTGCAGGAGGCAGCTACCAAGCTTTTCTTTGC
TCTTGTATTATACATTTAAGAGTTTGATAGATTTGCTCCTTTATTTTGTTGTGCGTTATACATTTTGTTAGAATGTAGAGGACTTTCTACTTTCCGCCCA
CCAGGGGCAAGTTTGGGGATATGATAGTGTAGGTCAAGCTCAGTAAAGTAATGTTTATTTTGTATTGAGCACTTCCATTGGACCATTTTTTAATCTGTTA
CATATTTTTTGAGATGTTACTAGTTCGTGATTGGAGGAGGATGTTATGAAGTAATGTCAAATGTGTTAGGGTTGTTTAGTATTTGAATTAGAAATAAGGT
ATTAATATATTAGTTTCGTATAATTTAGATGATATTTGGTAGGTAAATAGGAAATTAGTTATTTCTGTACTAACCTCAATTTGATGTGCTGATCATCTTT
TATGGGTAGCTTCATTTAATTTACTTCGCTTTCGATCTGTATGCATTCTTAATTTGGATTTTCACTAATTCCTCTCTTTTGCTTATTATTAATTTCTCTC
AATCCTTTTTGCATATATCCCCTCGATATATATCTATTAGATTTATTCTTTATTTCTCATTTGATTCCTTCTTTTTCATTATTTCTTCCTTACTTCCTTC
GTTCTTCCTTATTTTTTCATTTTCTCTATTAGTTATTTATAGTCCTTATTCTTTTACTTTTTATTCAACTTTCCCGATACTATATCCCCTTTCCTGTAAT
GTCTATTCTTAGTCTACCTTTTTTATTCTCCTGTTTCTATCTTTCACTACCTTCTACCATTTTCCATTAGTTTCATGAAATATTTTTATAATCCTACTTG
TTCTTATTATAGTTATCCTCAATTTTCTTCTTTCTCTTCTCCATCTTTTTTCTTTTATATCTTCTTTTTCTCTTCTTCTTTCATG
>LE_HBa0177N21_SP6_264491 (trimmed for quality and cloning vector)
TCAGCTTGAGTAGATCAATCAGATTATGTTGCTCTTAACTGCAACCACAGGAGGAGGTGGGTGCAGGAGGCAGCTACCAAGCTTTTCTTTGCTCTTGTAT
TATACATTTAAGAGTTTGATAGATTTGCTCCTTTATTTTGTTGTGCGTTATACATTTTGTTAGAATGTAGAGGACTTTCTACTTTCCGCCCACCAGGGGC
AAGTTTGGGGATATGATAGTGTAGGTCAAGCTCAGTAAAGTAATGTTTATTTTGTATTGAGCACTTCCATTGGACCATTTTTTAATCTGTTACATATTTT
TTGAGATGTTACTAGTTCGTGATTGGAGGAGGATGTTATGAAGTAATGTCAAATGTGTTAGGGTTGTTTAGTATTTGAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.936436
Expected error %
0.160712
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0177N21
Clone
Clone name
hba-177n21
LE_HBa0177N21
P177N21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found