Clone Read LE_HBa0180E20_SP6_264683

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0180E20_SP6_264683
Primer
SP6
ID from Seq. Facility
LE_HBa_180_E20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 1174 raw
Sequence
>LE_HBa0180E20_SP6_264683 (raw untrimmed)
AGTAACGGGAGGCTATAGTTCATGTATTATTACTCTTAATTGCTACATATCTTATCGTAAGAAGTTTAACTTCCTTTAAACTCGATACGTGACTTGTGTA
AAGTAAATATCTTACACTTTATCGATCTCGCCATAAAAAGGTAATCTATGTGGTAGACTGCCGCGTCGATAATGTAGAAAGACACCCTTTCGATTTCAAC
TTTGTATTGATCTGTATTTAAAAT
TGATACAACGCTTTGATAAAAAAAGACTATACAATTTCTGTGTGTATTAATACTAAAGAATACGATTAACATGGTA
TCATTAATACTTATGTCTCTGTGACTTTTAAATCACTGTCAGTGTAACTAAGCTTAAACAGTTAAATGATGCAGCCAATAAAGAAAGCATGCATTGTCTT
CTCTTCATTGGATCTTAAAAACAAAGTAATGAGATCGCAATTCTTATCCGTTGACGAAATGACTTATCATTGATATCAAAACTCACTCAACATCCTGATA
CGTATATATTGGGTTCGGAGTGGGTTTTCACTATTATTTACTTCCTTATCCTCCCACCCTACATTATTATTACAAGTAATCTAGCGATGATGTTTGTGTC
TACAATCCTGTCGGATTTATAAGATACTATCCATTCCACTTACCAATACTGTATGCCAACACTATTGATTGGCACTATTCCATAATAATCCCTACATGTG
CTAATATTCTTATAACTTAACATTCACTTCTATATCATCTCATTAGTGACACATGTTGTGGATTCCAACTCCAATGTATGCTCAGATACTGCTGATAAAC
TTTAGTCACGGATATGATCTCATATTAACCCATCGCATCTATGACCACTCTATCAACTTCCCTATATTCCTTCGAGATCGTCTAAATATAATTACTGTTC
TAAAATATGTAATACATCATCTAAAGATATCTCATAATCTAAAATATCACATTTTTATAACAGCTTACCCTATCTTTGATGGCATATACTAATTTATTGA
CAAATACTACACTATCGTTAACCTTCATCGCTCACACTGTTGATGTCTTAGATCATTCTCTACAGCAACCACATGATTACAACATTTCTATTCTTAATAT
AACTACTCGCTAATTATATTCCATCTTCATTATACCACCCTTTACTCCGTGACCACAGTAGTACCACAGAATAN
>LE_HBa0180E20_SP6_264683 (trimmed for quality and cloning vector)
TGATACA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.920248
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0180E20
Clone
Clone name
hba-180e20
LE_HBa0180E20
C12HBa0180E20
P180E20
Clone type
BAC
Contamination
none
Estimated length
67,235
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found