Clone Read LE_HBa0183J02_SP6_265153

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0183J02_SP6_265153
Primer
SP6
ID from Seq. Facility
LE_HBa_183_J02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
588 trimmed for vector and quality, 960 raw
Sequence
>LE_HBa0183J02_SP6_265153 (raw untrimmed)
NGGCGCTTCTAGATATATTGCTTTTACCAGATAAATAATTTCCTTACTTCTAACACAATAAGTCACCAATAGCCCAGAATTCCAAGACAACTGTAACTCA
AAGTAGAATTTTATAACTGAAAGCCAAAAAATCAAAGCATCAGGTTCTTATAACATCAATTCTAGTTTTTCTTATAAAGGTCATTATAATTCATTCAGCC
TGACAATTAGAATTTTGGAACCTAAAATGCTTACCATTTAGTTTGACAATCCAATTTTAGAATGCCACAGGGGCGAAAATGCAAGCTACTAGAAATCAAG
ACAACAAGCATACACATTTATAGATCAAAAAGAACTCACCAACCCTTTTGCTCCCCGGAAACTTTCTTTGCAAAACCTTTATGCAGTCCTGCAGAAGTTC
CCGACATAAATTTCAAATTTTTGACATAATCATAAAGTGACGAGATACATAAGAGAATCTCTAGCATATACGAACAAACAGTGAACGTGACTTGAAAAAT
AGCTGATGCATTTTGGTGATTATGGTTGACTACATGGTCACATTTACTTCATTACTCTGTATGTTTAACCACATAGCCAATATAAGTCCAACTTCACCAA
TTGAGTAATTGTAAGTTTAACTCTGCAACTTTGTAGGAAATAACGATATCTTTCTAGATTTGGAAAACAATGGTCAATTTGTTTTTACATCCCTTAAATA
TTAAATTGTGCCCGAATGTTTCTCTTAATATTACCTATAATCCAAATTAAAACTATGAACCCCGGTACGGGATGGATACATTTTTACCCTTTATTGAACT
GGAAAAAACAATTGAACTTTTGGTTTCCGAGGAATTTAAACTAAATTAATGTGGGGATCTTTTTAATTAAATTTTTAATAGGGATTTGTTACTGTCAACT
CTCAAAAAATTTTAAAAATTCAACTCTACATGTGGAAAAATATGGGAAAGTTTCCCTAAG
>LE_HBa0183J02_SP6_265153 (trimmed for quality and cloning vector)
ATTGCTTTTACCAGATAAATAATTTCCTTACTTCTAACACAATAAGTCACCAATAGCCCAGAATTCCAAGACAACTGTAACTCAAAGTAGAATTTTATAA
CTGAAAGCCAAAAAATCAAAGCATCAGGTTCTTATAACATCAATTCTAGTTTTTCTTATAAAGGTCATTATAATTCATTCAGCCTGACAATTAGAATTTT
GGAACCTAAAATGCTTACCATTTAGTTTGACAATCCAATTTTAGAATGCCACAGGGGCGAAAATGCAAGCTACTAGAAATCAAGACAACAAGCATACACA
TTTATAGATCAAAAAGAACTCACCAACCCTTTTGCTCCCCGGAAACTTTCTTTGCAAAACCTTTATGCAGTCCTGCAGAAGTTCCCGACATAAATTTCAA
ATTTTTGACATAATCATAAAGTGACGAGATACATAAGAGAATCTCTAGCATATACGAACAAACAGTGAACGTGACTTGAAAAATAGCTGATGCATTTTGG
TGATTATGGTTGACTACATGGTCACATTTACTTCATTACTCTGTATGTTTAACCACATAGCCAATATAAGTCCAACTTCACCAATTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943537
Expected error %
0.00967239
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0183J02
Clone
Clone name
hba-183j2
LE_HBa0183J02
P183J02
Clone type
BAC
Contamination
none
Estimated length
87,910
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found