Clone Read LE_HBa0092C14_T7_26619

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0092C14_T7_26619
Primer
T7
ID from Seq. Facility
LE_HBa_092_C14-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 908 raw
Sequence
>LE_HBa0092C14_T7_26619 (raw untrimmed)
GCCTATTTTGGTCTATGCGGATATATGAGATATCGGTGGAGTGATATAAGAACTATCACTTACCTACTTTTATAAGGATTTCATGTGGTACATTTTATGC
TCGTCTCTTCTTCTCGATTCAGTTTCTTTACCTACACCTTCGCTCCATTGCGTTTAGCGCCATGACGCCCACGATACATTATAAAGCAAACACCAGTATA
GCTGCGTTCT
CGAGTCTTTGTTGTACGAAATGATATATCTTTTAGTCGTGTAGACATACTATGAATCATACAACGATACATACAGTTATTATGTATTTCT
TGTTATTACTCGAATACAGTCTATAGTCTTTATGTCGTACCTGTAGGCAGCTATCCTTGAATCTTTTCTTTTTCATATAAGATATTTTCTTCTTTGACTG
TGATGCCATCATATCGTAGTTTCTTTGCGTCCTGTTGCTGTTATTTATCTGNTTACGAAGGGTGGCGGGGAGGGTTGAATACAATTTTTTTTTTTGTTCC
ACCTGCTCTGCCTTGACCTTGCCATTCGTTATGATCAAAAGATAGGGGGAGGTGATTATTTGACTTGCGATATCCTCATCATGTAATATCCTGATATGAT
CGGACATACTAACTATATACGTACTCAGAGGATACGATGACACACGAACATCGTGCAAATCAGTACGAAACAGTAAACCTAATTCTACTTTTCTCGGCCT
CTTCTTCTTCATTGTCTGTTTATACCTATATGTCTCTATTCTAGTTGTTCCACACCTTACTTCTCTGTTGTCTATGCCCGCTCAGGGCGTCGCGATTTAT
CTCGTCGTTGATGCGTCCGTTATGTATACTCTGCACTGTTCTCATCCACAAATCGCACACACCTATCTGCATTCCCGCCCGTACACTTCTCCTTATTCAC
GTGGTGTA
>LE_HBa0092C14_T7_26619 (trimmed for quality and cloning vector)
CG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.658114
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0092C14
Clone
Clone name
hba-92c14
LE_HBa0092C14
C03HBa0092C14
P092C14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found