Clone Read LE_HBa0107E16_SP6_267002

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0107E16_SP6_267002
Primer
SP6
ID from Seq. Facility
LE_HBa_107_E16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
680 trimmed for vector and quality, 856 raw
Genbank Accession
Sequence
>LE_HBa0107E16_SP6_267002 (raw untrimmed)
NCACGTGCAGATGTATTAAAATTGTTGGAACCCAAAAAGATTTGCTTGTCAAGTTAAATTGGTCCTGTCCTAGGTGTAATAACAAGAAAAACCTTGTAAA
TTTTCCATAAACCTAGGCACTCAAAACACCAATGATGTTCAATAAACTCTCATTATTTTTAGAAGCTAATTAAAAAGGAACATCAGCAGCATGAACAAGG
TATGTCACGGCCAAGGCCAACAACATTAATGCACATGCAATCCCTTGGTCAATTGTTGTACCTGCAAAACAGTCACAATACATAAAATAAAATAAGGATT
TAGAATTTGAAACTTATGAAGATTTTATAACGATCTCAAATTAATATACATTGTAATACAAATAAAAAGTCCTAATTCACGTGAAACCACAAGTAGTTGT
ACTATACGAAGATATTTGCATTTTGTGGCAAAGTACACCAAAACTTGGACACAAATGGATGCTATCTACTTCAATGAGAAAAAATTTGCAAGAGAATATT
TCCTTACCATCCAGAGAAGATAATTATTCATTAGATAAAAAGTTAGAATCTCAACAATAAATATGAATTTGTTATCGAGACGCTATGTACTTTGACATCC
CATCCAAACTTTCAAATATAAGTTGGATATAGCAAATAATGAAAATGGTTTGTAACATATCACATGAGTCCACATAATCCTCCTAATAGGCAGACAGAGA
TGAGTGAGGATCAATAAGTTTAGTTAAGAAGTTGATGTTGAACGCTATAACATATTCACATCACAAGATCTATCCCCCAACATAATCCTAATCCCACCAA
GAAAATAGTCCAATTCTAAATGATAACAACAACCAACTAGAAACTTCCGGATCTAA
>LE_HBa0107E16_SP6_267002 (trimmed for quality and cloning vector)
ATTGTTGGAACCCAAAAAGATTTGCTTGTCAAGTTAAATTGGTCCTGTCCTAGGTGTAATAACAAGAAAAACCTTGTAAATTTTCCATAAACCTAGGCAC
TCAAAACACCAATGATGTTCAATAAACTCTCATTATTTTTAGAAGCTAATTAAAAAGGAACATCAGCAGCATGAACAAGGTATGTCACGGCCAAGGCCAA
CAACATTAATGCACATGCAATCCCTTGGTCAATTGTTGTACCTGCAAAACAGTCACAATACATAAAATAAAATAAGGATTTAGAATTTGAAACTTATGAA
GATTTTATAACGATCTCAAATTAATATACATTGTAATACAAATAAAAAGTCCTAATTCACGTGAAACCACAAGTAGTTGTACTATACGAAGATATTTGCA
TTTTGTGGCAAAGTACACCAAAACTTGGACACAAATGGATGCTATCTACTTCAATGAGAAAAAATTTGCAAGAGAATATTTCCTTACCATCCAGAGAAGA
TAATTATTCATTAGATAAAAAGTTAGAATCTCAACAATAAATATGAATTTGTTATCGAGACGCTATGTACTTTGACATCCCATCCAAACTTTCAAATATA
AGTTGGATATAGCAAATAATGAAAATGGTTTGTAACATATCACATGAGTCCACATAATCCTCCTAATAGGCAGACAGAGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.934354
Expected error %
0.268812
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0107E16
Clone
Clone name
hba-107e16
LE_HBa0107E16
C08HBa0107E16
P107E16
Clone type
BAC
Contamination
none
Estimated length
115,053
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found