Clone Read LE_HBa0094C23_T7_27405

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0094C23_T7_27405
Primer
T7
ID from Seq. Facility
LE_HBa_094_C23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
405 trimmed for vector and quality, 874 raw
Sequence
>LE_HBa0094C23_T7_27405 (raw untrimmed)
GCTGGTACCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGAATTCTAGTTAGTTTCCCTGCCATTTTGGCATCTGTCACGCCCCCCCCCTT
TTAATCAAAATTCCTTTTTATTGTTTTCAAAGAAGAAGAGTTTTTTCCAATTAACGTGACATTTTGAAAAGAGAAGATTTTATTTATTATTTANGAGTCG
TTACTTGCAATTGAGTTTTATCTCCTATCTAAATAAAAATCTCAGGAACAAGACGGAAATTTTGACTCTTTTTTTAACGGTCCGCGAACTAGAAATTCGG
GAAGGATTTCGTGACCGAGGGAATGACCGGAAAGTGTTAGGCACCCCTCGAGTCCTGTGGTTCTCTCATTTATTTTAAACCTATTTAAATTTGCCTTATT
TATTTTTACTCTATTTAAAAACGTCTTTTTTTTTTCGTGTGTGTATCCCATTATTTTGAAAATTTGAGAATCTGTCTGTCTTAGTGTTTGGGGTAATTTT
TAAAATTTGAAAGGTTTATTTTGGGGTTTAAAGTTTTGTATATAAAAATTTTTACGTGGGGTTTTTTTCTTAAATTTTTCAGGCAAAAATAAATAGACAA
AAAAACGAACATTGTGAAGTGGCCTATTTTATATACGTTAATATTGTTTTTTTGTTTTTTTTTTATTGTATATAGACCCTTGGGGAAATTTTGCACTTAA
TAGCACGCTCTCATGCTCGTACTTGATTTTTTTTTTTGGTGTTTGTTTTTATTAGAGTGTGTTTAGGGTTGGTTGTGAATGGTTAAAGATATTAGAGTTA
GTGTTATTTTTTTTTATTCCCAATTTAGAATATTTATCTAGTGCTGTTTGATTCATATCCCTCTACTCTAATGT
>LE_HBa0094C23_T7_27405 (trimmed for quality and cloning vector)
AGCTTGAATTCTAGTTAGTTTCCCTGCCATTTTGGCATCTGTCACGCCCCCCCCCTTTTAATCAAAATTCCTTTTTATTGTTTTCAAAGAAGAAGAGTTT
TTTCCAATTAACGTGACATTTTGAAAAGAGAAGATTTTATTTATTATTTANGAGTCGTTACTTGCAATTGAGTTTTATCTCCTATCTAAATAAAAATCTC
AGGAACAAGACGGAAATTTTGACTCTTTTTTTAACGGTCCGCGAACTAGAAATTCGGGAAGGATTTCGTGACCGAGGGAATGACCGGAAAGTGTTAGGCA
CCCCTCGAGTCCTGTGGTTCTCTCATTTATTTTAAACCTATTTAAATTTGCCTTATTTATTTTTACTCTATTTAAAAACGTCTTTTTTTTTTCGTGTGTG
TATCC

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.938433
Expected error %
4.17798
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0094C23
Clone
Clone name
hba-94c23
LE_HBa0094C23
P094C23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found