Clone Read LE_HBa0183B02_SP6_277454

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0183B02_SP6_277454
Primer
SP6
ID from Seq. Facility
LE_HBa_183_B02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1296 raw
Sequence
>LE_HBa0183B02_SP6_277454 (raw untrimmed)
TGTCTGTCGGAGCGACTCTTTGAGGATACTCAGGGTAACCTGTGTTCTCCAAATTCTGCCCTATCATGCGAGTTCCGTACTCACATATATGGCTTGCGGC
GTTAGTTTATAACAGACGTTCATGGCACTTGTGGCCCTCTCGTAGAGACGCTTACTTCAGTCTTTATATACGTCCCTCGCGAGCATACATGCGCTGTGTG
TTTCGTTCGAGCGTAGGCAGTACAAACGTCGACAGAGAGTCTCCTCTATCAGAATGAGACACTCTCGCCATGCAGATCTGCTTCAGGGACTGAACATGGC
TGACATCGGCCGCAATGCATGGTGGTGACTTAGCAATACGGTAAGCAGAATGTTGACGGAGATAATTATAACGAGATAACTGTTTGGAGTGCATCAGATG
ATACTTACGGATCAGACTGGGAGTAATGATTTTATGCGATCGTCGC
GGAAAAGCTCTACCGGGGATAGTATGTGACGCTTGAACGTGATTAGCTTGCCTT
CAGTAGTAATATAATTTGTCGTATAATGCTACCTGCATTATCTTCTGTTTTATTTATGCTGATCCACTCTGAAGATTCTGCCGTTAGCATTGTACTCAAG
GTGATAAGTATATCACGTATATTCATGCTTGTGTATCATTACTGTCCCCTTTCAGAATTTCGTGCTCTTTTTATGTAACTTTTGCTATTGTCATCTACTT
TGTTGAATGAGATTTCTATCTCTGTCGCATGCGAGTTAAATGCTGCCAGAATCTCGTGCAATCTCGTTTAACTCTTCCTTCGTGGCCTTCTAACCTATAA
GGTTCCTGTAACTCTCTCCTCTCCAGTCTTGTTGGCCTAAATAACACTTCTGTAAACCATCTCTGTCTCTTTTGTCGTTATCTGTATTTTCGTCTGCTAT
GTATCTATTCTCCATTTGTATCGTTCTACCTGGCTGTGTTTCTTCTTTATCTTTCTTCTCATAACTATTTTCAAATTGCCCCTTCTTGTACATTTTTCTC
CTTTGTGTGCATTCTTTTATTATTCTCCCTATATCCTTGTGTCGATTCTTCTTGCTTTCTCTGTGTTATTTTCCGTTGCTGTTATCTGCCTGAGTATCAT
CTTATCTTGCCCTCTTTTGTGCTAATAACACTGTTTATTAATATCTTGGCGTGCGATATTTTTATACTTACTATTTATTTGCTTTCCCTACGCTTCTCTT
TTATCTATTGTCTTCTTTTCTCTCATCTGTCCTATCTTTATGTTATATTTTGCGGTGTGTGTAATCTATCTGCTGTGTCTCTGTTGTTCTTTGATC
>LE_HBa0183B02_SP6_277454 (trimmed for quality and cloning vector)
GG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.24822
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0183B02
Clone
Clone name
hba-183b2
LE_HBa0183B02
C12HBa0183B02
P183B02
Clone type
BAC
Contamination
none
Estimated length
113,196
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found