Clone Read LE_HBa0094L13_T7_27817

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0094L13_T7_27817
Primer
T7
ID from Seq. Facility
LE_HBa_094_L13-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
40 trimmed for vector and quality, 887 raw
Sequence
>LE_HBa0094L13_T7_27817 (raw untrimmed)
TTGGTTCCGGGGGATCCTCTAGAGTCGACTTGCAGGCATGCAAGCTTGCCCTTTTTATAGTCGATGACACCATTAAAGGCTCCTGTTTTGCNGAGGNNNG
GAGGGCAGNAAGCCTGGTAGAGAGATANANNNACCAACAGGGGGAAGNAAGGAGAGAAAAATGTGGGAATCAAAATTAAAAAAAGGGGGGAGGGGGGGGG
GGGGGGAGCCCCCCGGGCCTTTTTGGAAAATAAATTTCCAAAAAGTTTTTTTGAAGGGGGGGGGGGGGGAAAAATTGTTTTATAAAAAAAAAAAAAATTT
TTTTTTTTTTGTTTTTGGGGGATTTTTTTCAATTTTTTGAGAACTTTTTTTTTTCCCCCCAAAAATTATGTTTTTTTAAAAAAAAAATTTATTTTGGGTT
TTCGGTGTTTTTTTTTTTTTGTTCCCCGGGGGAAAAAAAGAAGCCCTTCCCCCCCCCCCGTTTTTTTTTTTGGGGGGTGTTTGGGAGGGAAGAGAAAAAA
ATTTTTTTTTCAAAAAAGTGGGGGCCGCCGGCTGTTGTTTGTAGAAAAAAATAAAAGAGGAAAATTTTTTTGGGGGGGAGTCATTATTTTTTTTTTTTTT
TTTTTAAAAAAAAAAAGGGGGGGGGGGGGGGGTTTTTTTTTCCCCCCCCCCCTTTTTTTTTTTTTTTAAAAAAAAAAAATTTATTTTTTTTTTTAAAAAA
AAAAAAAAAAAAATACGTCTTTTTTGCTTTTCCTGTTTTTTTTTTTTATTTTTGGAAAGATTAGATAGATGTGTTGTTTGTGTGAG
AGGTGAGTTTTTGT
TTTTTTTTTTTTTTTTTTATTTTTTTTTTGTTGTTGAGGGGTTGGGGGGTGTGTGTATACCTTTGCCCTGTTCTTTCTTTTTTTTTT
>LE_HBa0094L13_T7_27817 (trimmed for quality and cloning vector)
AGGTGAGTTTTTGTTTTTTTTTTTTTTTTTTTATTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.354759
Expected error %
4.04068
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0094L13
Clone
Clone name
hba-94l13
LE_HBa0094L13
P094L13
Clone type
BAC
Contamination
none
Estimated length
100,482
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found