Clone Read LE_HBa0187G12_SP6_278657

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0187G12_SP6_278657
Primer
SP6
ID from Seq. Facility
LE_HBa_187_G12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1060 raw
Sequence
>LE_HBa0187G12_SP6_278657 (raw untrimmed)
ACAACTCTTGCGGCCAAAATGTTGTTGATCTGGCTTGATGGCCTTTTCACCGCCGTTATCGCAAGAAGATGATGACCTGCTACCCTTGGGTCTATTCGCG
ACATTCATTCGTATCTACA
AGAAAATACTTCTTTATACTCTTTGAGTAAGTCGACATATGCCTCTTCATCATCACTCGACTCCAAAATATTCACCTAAGT
GTGTTCTTTATGGTCACCTTGTTCGAAGGTTGATTCTTTTCACTGTATCGACGATTACTTCTATTCCATCCTCAATCTTTGGGTGGCTCATCTTGACCCT
CTCTATCGTCTCGCGGGTCTCTGTTCCTCGAAACATATATGGTAATATTATGTAACATTGTCCTTACTCTACGAATCCTTTTAATTGGCCGAAAACAAAT
GCCCTCCTTCGCTGTGTCAGTGCCTTTGCTCATCCACCGGGATCTCTCATTTTCTATCGCTTCTCCCGTTCGTTAAGTATAACTCTACATTTACCCGCCT
TTAGATCATTAAGCCATTTACCCCTCCCAGACCGTCCTACCCCATATGTATAATCTCCTCACATGTCCCGCTCGCCATCCCGATCCCCCTACTTCCATTC
CCTATCTTTTCCCCGAATCCCTGCTCCAACTCCCACGCTCTGACCCCCTCTCTACCTCTACTTTACTCATCCTCTTTTCCTCCTTCCTATTCTACTACCT
TGCTCCTTCTCTAACTCTTCTTACCCTTCTCTTTCCTTCCTACTCTCCACCTCCTGTCCCCCCTCTCCTCCAGCTCTCCTTCTATTAATCCTTCCCCCTC
CCTACCACTCCCCCGTATACTACCTTGCCCCTATCTTCCCTTCCTCCTCACCCATCCTCACCTTACTTAACCTCCTCCTCCTCTATCCCATCACCTATCT
ATCTTCTTCACCTCTCTCTCACTCCTTATCACATCTCTACCCCCTTTTCCCCTACCCTCATCTCTAACTTCTCTCCCCTTGCCTTCACTTCTGTTCTCTC
CTCCTCCTTCCACTCTCCTATACACACCCTCTGTCCCATGCTCCACTCCCATATACCTCA
>LE_HBa0187G12_SP6_278657 (trimmed for quality and cloning vector)
AGA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.62679
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0187G12
Clone
Clone name
hba-187g12
LE_HBa0187G12
C03HBa0187G12
P187G12
Clone type
BAC
Contamination
none
Estimated length
149,038
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found