Clone Read LE_HBa0095C08_T7_28143

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0095C08_T7_28143
Primer
T7
ID from Seq. Facility
LE_HBa_095_C08-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1185 raw
Sequence
>LE_HBa0095C08_T7_28143 (raw untrimmed)
CATAGTCTAGATACAATACTGACTTGTGCANCTGATACTNCATGCCACATGTAGTACGTCAATATCACGAANCAGCTCGCTGCATCATTGAGAGTCTTCT
GAGACATAAGTGTAACTCATCGGANNCATAATAACATACAGCCCTTCTGAGTGCAGTACTGCGTGTAATGCGGACTTGCCTCGTCATACCTGCCTAGCAC
GGAGAGATCCTTGCACTCTGACTAGCTAACCATGCATTCAGATGCTCCTGCCGGTCGAGCATAACTTAATAAGAAGTTGCNAGCGGGCGCGCATACAGTT
CTATCACGCGTACGGCGCGTTGGACTGATGTTAGCGCGATCGTGTGTCGCTGACAGACGCTAATGTTTNGGAATTGTGCGCAACACTCTCAAGTAAGTGG
TCATCAGGTTGACTATTGACTATGTGCTCGATCTCNCAAACAGACTAGCGCACTGATGCGGGAGCAACTGCACTACCGATACTCTATCTCAGCTCAGCGA
ACGATATCACTACCTCGCATCTAACACCTGCTCATACATTGGATCGCTCATATCTCATANTACTCACTGATAGCTGTATGNCTAACTATCATAACAAGCT
GCTTGATCGTCAATNAGCTCCCTCTTGACATTATAAGTTAATGAAACAGCTTCATCTGCCGATTCGGACTCTGAACAGAGTCTCNGCGAACACTGGATAC
GTATACAGAAAACGCAATATNACGGTTCTATGATACAATATGCAAATTATACATACTATCTACAAACAGCCACTAGTTCTC
TACGCGTCGCTACGACGAT
GATCTCGCGACATACATGAACACCGCTCAGTCCTCGCGATCTGCACTATCTCTCTCGTGATTTACTACATCTCACTGCACGCTNTCATCGCTATTGCGTC
ACATCGTTCTAACTGTTAGAATTCTATTATCAATTACTACGATCACGGAGATCTCGACGCTCGGNGACTCGTATCAGTGCTGACTCATCCGCTGCCTCTG
ATCGACACTGTGTTTTGTTGAAGNTCTCTATCATGCCTATACTACGGCATAACACGTGACATCCACCGCTACACACGTCTACCGTCACGACGCACAGGAT
CGCTTCGATGTCACGAGGANACTACGTTATGACTGCTATCTTTGCATTCACTACTACTGGCGCTCGGCATCCTGACGACACACGA
>LE_HBa0095C08_T7_28143 (trimmed for quality and cloning vector)
TACG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.669438
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0095C08
Clone
Clone name
hba-95c8
LE_HBa0095C08
C02HBa0095C08
P095C08
Clone type
BAC
Contamination
none
Estimated length
90,173
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found