Clone Read LE_HBa0095C18_T7_28163

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0095C18_T7_28163
Primer
T7
ID from Seq. Facility
LE_HBa_095_C18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1224 raw
Sequence
>LE_HBa0095C18_T7_28163 (raw untrimmed)
AGATATCACGACGACAACTAGAGCGCAGACGCTGCACGACTGTATGCAGAACCTCACCCTATTCAGCAAACTCATAGGCATTGCCGATTCATTCACGAGA
GCTATGTGGGCTGAGGTGGTTCATATACGTGACTATCTAGTTGCCAACGCATCTGACCAGCTCCGTCGAGACGATCTCGACGTCTGATCGTATTAGTATA
TTAGCCNGATCATCCTGTNCTCTGATCGCGGATTCTCGTATGTGCGATGTTGTGCATCTGCATATACTAACTGGTACTCATCATCTCAATAGCGAACTGC
TATTGTGTGCCAACGCTGATGATATGCGAACATCATAAGTTACAGCACACAGACGTGACGTNGCGTGCAACACTCCACGATGAAACAGAATGCGACCGTG
TCAAGGACATCTACGCCGTAGGCTCATGCACGCTACTATATGTGTCAGCGTCCACATAGTACGACGCTGCTAATATGCANCTGTATTCACGTCGATCGTC
GACAAATAGTATCGTGTATCATCATCTGTACAGGTGATGCTNCTCCACATCCGCAGCTNGAGAGTAGGGAGATGAGGAGTGAGATCGTCAGAGAGCGAAG
CCCCTCACGAACTACTACTGACGCGCGAGCGCATACCGACCGAATCGAACAACAGTGTGGTGTGTGTAGTGACAGCAGTATTANATATGATATACATAGT
ATGCTGTCATCTACGGTGCTATTNCATTACACTCGTAGTGCGCGGTCGCGCGTCGANCTGCNATCATCAGNTACGCGTCAGACAANATCATGGTCGNGCC
GCTGGACCTGATCGATATGGTTATTGCCGCNGGCGACATTCANCTGCGANTGCANCNACANTGCTGTGCACAGCCGCGACCTGACGACATACATCCATAC
TGCCGGAGCTCCTANCAATNGGAGTCGCACATATATANTACGATCGTACTAATCGAAAGCGCATAAGAGCGATCCNTTNAGATTCTATCACGCATACTCT
CGGNCTGCGTNCAGTACACCTGATACCACTGTATGCTGTCTNGGT
ACGCGCTGCTTAACGTCGCATCCTCTGGGCGAGACGCTGACGCGCTACTACGTGA
GCGGAGNTAACACGTCACTNANAGTGTACGGCCCGTCGTACTGCTCGTGCAGCTAGTCACGCATCACTCGCGACAGAGATGGTGGTTCTCATTTNCGGAC
CGACAGTCGCGGCTGCGGTACGTN
>LE_HBa0095C18_T7_28163 (trimmed for quality and cloning vector)
ACGC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.09951
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0095C18
Clone
Clone name
hba-95c18
LE_HBa0095C18
C07HBa0095C18
P095C18
Clone type
BAC
Contamination
none
Estimated length
112,931
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found