Clone Read LE_HBa0006L20_SP6_2870

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0006L20_SP6_2870
Primer
SP6
ID from Seq. Facility
LE_HBa_006_L20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
828 trimmed for vector and quality, 952 raw
Genbank Accession
Sequence
>LE_HBa0006L20_SP6_2870 (raw untrimmed)
AAAAAGAAATGGTTTTTCTTTCCCCATTGTATGTCAANCTNANTNCNNNANTNTCTCTGCAATTGTGAAGACAGGACTATTACAGTCAAAAGCAGGTATA
GATGACAGGTTGCTGGCTGTCACTGATCTTTGTGCCACTCCTTGGGGATCTCTAATCGCGGTGGCTATTCAGAGGTAAGTCTCTCGTTATGTCAACATGT
TGACTTTTCATCCTTTAAAGAGCTCTATTAATTTGTTCTTGAATCATAATACCTTTCTCCGTTGAACTGTAGCTTGGCAGGCGTCATGCTTTTGAGTTGC
AACCTTTCAGCTAAATCTCTCCATGTTGCAAGAGTAGGTTCTTTACCATCTCTAAATCACGAAAATCTATTTAGATTTTGTATCGTTCAAAGTATCAACA
GCCAGCATCAAGTGGAAATGTTATATGATGCTATTTGACAATATCTTTTTATTTTTTTTTAATTCTGAAGGAAGGGAAGCCTTGACATAACTAGTGAAGT
TGTTGTCATGTGACTTAGGCCATGGGTTCAAGCCGTGGAAACAGCCTCTTGCAGAAATGCAGGGTAAGGCTGCATAGACCCTTGTGGTCTGCCCTTCCCT
GAACCCCGTGCATGGCGGAAGCTTTAGTGCACCGGGCTACCCATTTATTTTGTATTTGTTTAACCTTTTCCGTTGGATGTAAATTCCAGGTGGTTCCGAT
TCCTGGGGAGACTTTTATTCCCACAAGCTTAGCAGCTGCCTCTTCATCGAATCAGTTGTGGATGGTCATGGGTGCATCGACTCTATGTACTTCCCATTCA
GCACCTTTGGCTTGTGTGAAGGTTCTCAATGGTTTCTGCGAGAGCAACCAGGACTCTGTTGAGCACGAGGCACGTGTTTTAGAAGATAAAGATTACCAGG
TAGTGAACACTCCTTCAAACGTGCAGGGGAGTTCGTCATTGAAAAGAAGCAC
>LE_HBa0006L20_SP6_2870 (trimmed for quality and cloning vector)
TCTCTGCAATTGTGAAGACAGGACTATTACAGTCAAAAGCAGGTATAGATGACAGGTTGCTGGCTGTCACTGATCTTTGTGCCACTCCTTGGGGATCTCT
AATCGCGGTGGCTATTCAGAGGTAAGTCTCTCGTTATGTCAACATGTTGACTTTTCATCCTTTAAAGAGCTCTATTAATTTGTTCTTGAATCATAATACC
TTTCTCCGTTGAACTGTAGCTTGGCAGGCGTCATGCTTTTGAGTTGCAACCTTTCAGCTAAATCTCTCCATGTTGCAAGAGTAGGTTCTTTACCATCTCT
AAATCACGAAAATCTATTTAGATTTTGTATCGTTCAAAGTATCAACAGCCAGCATCAAGTGGAAATGTTATATGATGCTATTTGACAATATCTTTTTATT
TTTTTTTAATTCTGAAGGAAGGGAAGCCTTGACATAACTAGTGAAGTTGTTGTCATGTGACTTAGGCCATGGGTTCAAGCCGTGGAAACAGCCTCTTGCA
GAAATGCAGGGTAAGGCTGCATAGACCCTTGTGGTCTGCCCTTCCCTGAACCCCGTGCATGGCGGAAGCTTTAGTGCACCGGGCTACCCATTTATTTTGT
ATTTGTTTAACCTTTTCCGTTGGATGTAAATTCCAGGTGGTTCCGATTCCTGGGGAGACTTTTATTCCCACAAGCTTAGCAGCTGCCTCTTCATCGAATC
AGTTGTGGATGGTCATGGGTGCATCGACTCTATGTACTTCCCATTCAGCACCTTTGGCTTGTGTGAAGGTTCTCAATGGTTTCTGCGAGAGCAACCAGGA
CTCTGTTGAGCACGAGGCACGTGTTTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.977205
Expected error %
0.300033
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0006L20
Clone
Clone name
hba-6l20
LE_HBa0006L20
P006L20
Clone type
BAC
Contamination
none
Estimated length
117,083
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found