Clone Read LE_HBa0107J04_SP6_299820

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0107J04_SP6_299820
Primer
SP6
ID from Seq. Facility
LE_HBa_107_J04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
654 trimmed for vector and quality, 844 raw
Genbank Accession
Sequence
>LE_HBa0107J04_SP6_299820 (raw untrimmed)
NNNNCCCGATAGCCATTTGTTCCATAGGAGAGAGTGGTTTGTTGATGACTAGAATGACACGAAAAGGCAGTGATTTGGGCGTTTCGGAGAAAAAGAGTCG
TTGGATCGTTAAAGTGGATCAATGTACAGGGGAAGAACATGTATTCAGGGTCAGATCTCCACATGGAAAATCACTTGAGGCATAGGTTTTGATTTAGTGC
TATTTGATATATAGATTGTAGAGTATACACTATAATATTTTTCCAGTATCTGAAATAATAAGCAGACATTAGCAGGCTATGCATTTTGATCCAGAGATTT
AATCGTGTTATAGTAGACTCACAAGTTAGCTGTTGAGGTTGAATATACCTTTACATGACATTTGAGCCAGATTTATACCTGTTTGGGCTCCTGGTCGATC
AGATTTACTCATTCTCCATTTAAATGCTGTCAAGCCTAATCAATGACATTGGATTATGAAATGAAGCAAATATAATTTCATCTTTAAATCGGCTCCTCAT
GATATTAGCAGGATAATGAGCAAATGATTGGCTTCATTTCCATCATTTGGCAAGTTCTCATCCAGTTATCTACAGAATCGATACAATAACTAAGCCTCCA
ATCTCCAGGAAATTGGAGTTTGTCTACAAAAATTCTCGCTAGCTATTTGTGTTGCTCCTTATAAGTCTTTTGCTGACTATATATTTTTTTTTCCCTTTTG
AAATTTTTAGCCCTTAATCAATAGTTAAACGAAGCATTAATACATTTGCTTATTCTGCACTCATCAACATGAATTCAGCCGGGGCCAAACATGTGGTCTT
CCCCAGGATAACCATTATTAATTTAGGGCTAAACAAGTTTCCTT
>LE_HBa0107J04_SP6_299820 (trimmed for quality and cloning vector)
GGAGAGAGTGGTTTGTTGATGACTAGAATGACACGAAAAGGCAGTGATTTGGGCGTTTCGGAGAAAAAGAGTCGTTGGATCGTTAAAGTGGATCAATGTA
CAGGGGAAGAACATGTATTCAGGGTCAGATCTCCACATGGAAAATCACTTGAGGCATAGGTTTTGATTTAGTGCTATTTGATATATAGATTGTAGAGTAT
ACACTATAATATTTTTCCAGTATCTGAAATAATAAGCAGACATTAGCAGGCTATGCATTTTGATCCAGAGATTTAATCGTGTTATAGTAGACTCACAAGT
TAGCTGTTGAGGTTGAATATACCTTTACATGACATTTGAGCCAGATTTATACCTGTTTGGGCTCCTGGTCGATCAGATTTACTCATTCTCCATTTAAATG
CTGTCAAGCCTAATCAATGACATTGGATTATGAAATGAAGCAAATATAATTTCATCTTTAAATCGGCTCCTCATGATATTAGCAGGATAATGAGCAAATG
ATTGGCTTCATTTCCATCATTTGGCAAGTTCTCATCCAGTTATCTACAGAATCGATACAATAACTAAGCCTCCAATCTCCAGGAAATTGGAGTTTGTCTA
CAAAAATTCTCGCTAGCTATTTGTGTTGCTCCTTATAAGTCTTTTGCTGACTAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96106
Expected error %
0.0806322
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0107J04
Clone
Clone name
hba-107j4
LE_HBa0107J04
P107J04
Clone type
BAC
Contamination
none
Estimated length
88,527
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found