Clone Read LE_HBa0116P23_SP6_300674

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0116P23_SP6_300674
Primer
SP6
ID from Seq. Facility
LE_HBa_116_P23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1182 raw
Sequence
>LE_HBa0116P23_SP6_300674 (raw untrimmed)
TCTAAATACAATTGTTTCATGGATCTCGCTCAAGGTAAGGCCGATGGCTTTTCAGGTGCATATTCAGCTTGCTTGGGACGGAATGGACATTCCAATTGTG
GTCTACTTTGGCCGCTCGAGAACTTCACCTTTACACAATTTATCTGGCTCAGAAGCGTCTTGCTGCTTATGCTAAACTGCATCCTTGATTAACGGCTCAC
ATTGAAGCTCGTTCACATATGCATGCTTATCATCAAGAATAGACATATCGACTAAAACAATGGAATTTACTAACATTACTATCCTTAGAATGCTCTCTTG
TGTACGTTTGATACACCCTTACATTAGCCTTCTTTACTGTCCCTTTGTGTATCCATGCTTCCATACCTCTCCTGCTCCTCCACCATTGTTCTTCTATCCC
CGTTATACTAGTTCATTAATCGGCTTGCTGCACTAATGGCCATAGAATTCATCAATTCTTCCCAACTCGTCTTTCTTACCCCTTCTAACTCATCTCGTCA
AATCTCTCCACACGCTTATCCTTACTCACTCCCTCTACTACTATATATTTCTCTACCTCTCCCTCTACCTTATTCTTTATCTCTTTCTTCTATACCCTCC
CTTACTCTCCCTCTTGCCTCTCCTCCTCTATTTACACCCCCTCACCTCTCACCTCCACTTCTTTACCTTCACTTTCTTCTCCTTACCTCCTCACTACACT
TCTCATCTTTTCTCCAACCTCCTCTACTCCCTCACCTCCCGTTCTCACTCTATTTCTACTCTACTTCTCCCTCTCACCCTTTCTCTTATCTCATTATTAT
CCCTCCTCTCTTCTTTCTCACTATCTTTTCTTCCCATCCTATATCTCCCATCTTTTTCCTTCCTCCCTTCCCCTTTTCTATCCTCTCCTACCCTTCTTCT
CTCCTCATTCACCATCACCTTAACTCCCTCACACCAATCCTTCCTACTATCTCCTCACACCATTTCCAATTATCACTATCACGTTACTCTAACCCTAATT
TCCCCCTCTTCCCATCTTCTTCTCTCTCTCTTCCTACTACCCTTTTCCATCTCACCCTCTTACTTCTCTTCCCCTTCACTCCCTATTTTCATTCTCTGCC
CCTCTACATAAATCGCTATCATACTTCCTGCTACCCTTCCATATTACTCTCTCTCCCTCCCTTCCATCATCCTTTGTATCAA
>LE_HBa0116P23_SP6_300674 (trimmed for quality and cloning vector)
TACAAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.24937
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0116P23
Clone
Clone name
hba-116p23
LE_HBa0116P23
C03HBa0116P23
P116P23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found